Gene Lcho_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0659 
Symbol 
ID6163772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp713725 
End bp714219 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID641663409 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001789699 
Protein GI171057350 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TGGACGAGGC CAATCTCGTG CCCGGTTCGC GCCGCGAACA TTTCCTGCGC 
TATCACGACG GCCGCGAGCG CCGCCTGCTG GTGGTCGACC AGGAGGTGCC GTATCCGGAT 
GGCATGCTGA TCGTCTCGCG CACCGACCCG GCCGGCATCA TCACGCATGC GAACCAGGCG 
TTCATCGACA TGTCCGGCTA CACCCGCGAC GAATTGATCG GCCAGCCGCA CGCGATCCTG 
CGCCACCCCG ACATGCCGTC GGCGGCGTTC CGCGACCTCT GGGACACCGT CAGCCGCGGT 
GCCAAGTGGC AGGGCTACGT CAAGAACCTG CGCAAGGACG GCATGCACTA CTGGGTGTTC 
GCCACCGCGA TCCCGAACGT GCGCGACGGC CGCGTGGTGG GCTACACCTC GGTGCGCCGC 
AAGCCCTCGC GCACCAAGAT CGATGAATGC CAGGCGCTCT ATGCGCGCCT GCGCGCTGAA 
GAGATGTCGA CATGA
 
Protein sequence
MTDMDEANLV PGSRREHFLR YHDGRERRLL VVDQEVPYPD GMLIVSRTDP AGIITHANQA 
FIDMSGYTRD ELIGQPHAIL RHPDMPSAAF RDLWDTVSRG AKWQGYVKNL RKDGMHYWVF 
ATAIPNVRDG RVVGYTSVRR KPSRTKIDEC QALYARLRAE EMST