Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1393 |
Symbol | |
ID | 4021870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1560386 |
End bp | 1560934 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637961585 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_568531 |
Protein GI | 91975872 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.959449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTTC GCAGCCGGAC ATTGCCCGTG AAACAAGTCG TAACACCGAC CACCGTCGAA GTGTTCTTCG ACGCCGACGA CATCATTGTC TCCAAGACCG ACCTCAAAGG CCGGATCACC TACGCCAATA AAGTATTCAC CGATATCTGC GGATACAGCG AAGCAGAGCT GATCGGCCAG CCGCACTCGA TCTTGCGCCA TCCCGACATG CCGCGCTGCG TGTTCAAGCT GCTGTGGGAC ACGCTGGCGG AAGGTCGCGA GATCTTCGCC TACGTCAAGA ACATGACTCG CAAGGGCGAT TACTATTGGG TCTTCGCCCA TGTCACGCCG TCTTTCGACG CGAAGGGGCA GGTGATTGGA TATCACTCCA ATCGCCGGGT GCCGGATCGC CGTGTCGTCG CCGCGCTGGC GCCGGTTTAC GCCCAGTTGT GTGAGGTGGA ATCCCATCAT CGCAACGGCA AGGACGGTCT CGCCGCCGGC TATCGGCATC TGATCGATTT CGTCAAAGCG AAAAATGTGT CCTATGATCA GTTCATCTTC TCTGTCTAA
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Protein sequence | MIVRSRTLPV KQVVTPTTVE VFFDADDIIV SKTDLKGRIT YANKVFTDIC GYSEAELIGQ PHSILRHPDM PRCVFKLLWD TLAEGREIFA YVKNMTRKGD YYWVFAHVTP SFDAKGQVIG YHSNRRVPDR RVVAALAPVY AQLCEVESHH RNGKDGLAAG YRHLIDFVKA KNVSYDQFIF SV
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