More than 300 homologs were found in PanDaTox collection
for query gene SYO3AOP1_0920 on replicon NC_010730
Organism: Sulfurihydrogenibium sp. YO3AOP1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010730  SYO3AOP1_0920  putative PAS/PAC sensor protein  100 
 
 
170 aa  351  2.9999999999999997e-96  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_4009  PAS  52.33 
 
 
172 aa  192  2e-48  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4977  putative PAS/PAC sensor protein  50 
 
 
177 aa  186  9e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.13761  n/a   
 
 
-
 
NC_007778  RPB_1312  putative PAS/PAC sensor protein  50.58 
 
 
174 aa  180  8.000000000000001e-45  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.723682  normal  0.171791 
 
 
-
 
NC_007958  RPD_1393  methyl-accepting chemotaxis sensory transducer  51.48 
 
 
182 aa  179  1e-44  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.959449 
 
 
-
 
NC_007643  Rru_A2378  transcriptional regulator  51.46 
 
 
174 aa  178  4e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1071  putative PAS/PAC sensor protein  48.55 
 
 
178 aa  175  2e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4662  putative PAS/PAC sensor protein  48.21 
 
 
168 aa  176  2e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.193201 
 
 
-
 
NC_011004  Rpal_4683  putative PAS/PAC sensor protein  48.28 
 
 
173 aa  174  4e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1413  putative PAS/PAC sensor protein  50 
 
 
185 aa  172  9.999999999999999e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.026067  normal 
 
 
-
 
NC_011004  Rpal_4792  putative PAS/PAC sensor protein  48.26 
 
 
174 aa  172  2.9999999999999996e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4975  putative PAS/PAC sensor protein  47.98 
 
 
178 aa  170  1e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.161434  n/a   
 
 
-
 
NC_007958  RPD_3908  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
174 aa  169  1e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3464  transcriptional regulator  46.29 
 
 
174 aa  165  2.9999999999999998e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0158  PAS sensor protein  48.75 
 
 
170 aa  163  1.0000000000000001e-39  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00559927  n/a   
 
 
-
 
NC_003912  CJE1325  methyl-accepting chemotaxis protein  52.5 
 
 
164 aa  160  9e-39  Campylobacter jejuni RM1221  Bacteria  normal  0.0735034  n/a   
 
 
-
 
NC_008787  CJJ81176_1206  methyl-accepting chemotaxis protein  51.27 
 
 
164 aa  159  1e-38  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0368  PAS sensor protein  51.63 
 
 
168 aa  159  2e-38  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.580475  n/a   
 
 
-
 
NC_009664  Krad_3403  PAS sensor protein  45.71 
 
 
189 aa  159  2e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.263742  normal  0.531721 
 
 
-
 
NC_013521  Sked_05500  PAS domain S-box  42.6 
 
 
194 aa  158  4e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.414164  normal 
 
 
-
 
NC_009802  CCC13826_1233  methyl-accepting chemotaxis protein  49.68 
 
 
166 aa  149  2e-35  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0044  putative PAS/PAC sensor protein  45.86 
 
 
162 aa  149  2e-35  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1962  methyl-accepting chemotaxis protein  47.13 
 
 
166 aa  147  5e-35  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2233  putative PAS/PAC sensor protein  44.31 
 
 
177 aa  146  1.0000000000000001e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.17522 
 
 
-
 
NC_012039  Cla_0964  putative PAS domain signal transduction sensor protein  49.06 
 
 
163 aa  143  1e-33  Campylobacter lari RM2100  Bacteria  normal  0.695373  n/a   
 
 
-
 
NC_003912  CJE1323  methyl-accepting chemotaxis protein  47.74 
 
 
165 aa  142  2e-33  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1204  methyl-accepting chemotaxis protein  47.74 
 
 
165 aa  142  2e-33  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1012  methyl-accepting chemotaxis protein  44.94 
 
 
171 aa  142  2e-33  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.63093  n/a   
 
 
-
 
NC_009714  CHAB381_1223  signal-transduction sensor protein  43.83 
 
 
189 aa  140  8e-33  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.658782  n/a   
 
 
-
 
NC_012039  Cla_0963  putative PAS domain signal transduction sensor protein  44.17 
 
 
163 aa  137  6e-32  Campylobacter lari RM2100  Bacteria  normal  0.598174  n/a   
 
 
-
 
NC_009707  JJD26997_0540  methyl-accepting chemotaxis protein  46.79 
 
 
166 aa  136  1e-31  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  52.46 
 
 
517 aa  130  9e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2812  putative PAS/PAC sensor protein  47.37 
 
 
166 aa  129  1.0000000000000001e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.494423  decreased coverage  0.000000324615 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.28 
 
 
521 aa  127  5.0000000000000004e-29  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  47.41 
 
 
521 aa  127  1.0000000000000001e-28  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_007963  Csal_2022  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.89 
 
 
748 aa  125  2.0000000000000002e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1522  PAS sensor protein  41.1 
 
 
225 aa  125  3e-28  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.533099  n/a   
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  48.76 
 
 
714 aa  124  4.0000000000000003e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.52 
 
 
552 aa  125  4.0000000000000003e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_010524  Lcho_0659  putative PAS/PAC sensor protein  47.37 
 
 
164 aa  124  8.000000000000001e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.41 
 
 
529 aa  124  9e-28  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.41 
 
 
529 aa  124  9e-28  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  46.55 
 
 
521 aa  123  1e-27  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.96 
 
 
550 aa  121  4e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  46.9 
 
 
527 aa  121  4e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1521  putative PAS/PAC sensor protein  39.26 
 
 
228 aa  119  9.999999999999999e-27  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.950455  n/a   
 
 
-
 
NC_009441  Fjoh_2936  putative PAS/PAC sensor protein  42.77 
 
 
201 aa  120  9.999999999999999e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  0.178135  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  50.42 
 
 
511 aa  119  1.9999999999999998e-26  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.7 
 
 
523 aa  119  1.9999999999999998e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  46.55 
 
 
521 aa  119  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.33 
 
 
514 aa  119  1.9999999999999998e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.11 
 
 
521 aa  119  3e-26  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.43 
 
 
514 aa  119  3e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  48.11 
 
 
521 aa  118  3.9999999999999996e-26  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.11 
 
 
521 aa  118  3.9999999999999996e-26  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  45.53 
 
 
515 aa  118  4.9999999999999996e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  47.17 
 
 
521 aa  117  4.9999999999999996e-26  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1487  PAS domain-containing protein  45.22 
 
 
158 aa  117  6e-26  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.0000133262  n/a   
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.86 
 
 
519 aa  117  6e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.9 
 
 
954 aa  117  7e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  46.34 
 
 
521 aa  117  7.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.6 
 
 
566 aa  117  7.999999999999999e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.15 
 
 
521 aa  117  9e-26  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
522 aa  117  9.999999999999999e-26  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  43.9 
 
 
521 aa  117  9.999999999999999e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  43.09 
 
 
521 aa  116  9.999999999999999e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_012560  Avin_24380  aerotaxis receptor Aer  47.79 
 
 
567 aa  116  9.999999999999999e-26  Azotobacter vinelandii DJ  Bacteria  normal  0.0650163  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.34 
 
 
521 aa  116  9.999999999999999e-26  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  43.88 
 
 
565 aa  116  9.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
534 aa  117  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.98 
 
 
522 aa  115  1.9999999999999998e-25  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  44.8 
 
 
522 aa  115  1.9999999999999998e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  46.23 
 
 
521 aa  115  1.9999999999999998e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_007575  Suden_1520  putative PAS/PAC sensor protein  44.62 
 
 
147 aa  116  1.9999999999999998e-25  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.000785812  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.88 
 
 
556 aa  115  1.9999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  50.98 
 
 
522 aa  115  1.9999999999999998e-25  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  50.98 
 
 
533 aa  115  1.9999999999999998e-25  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_2525  putative PAS/PAC sensor protein  40 
 
 
208 aa  116  1.9999999999999998e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0659487  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  46.23 
 
 
521 aa  115  3e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.97 
 
 
520 aa  115  3e-25  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
532 aa  115  3e-25  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  42.04 
 
 
549 aa  115  3e-25  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  47.17 
 
 
521 aa  115  3.9999999999999997e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  47.86 
 
 
945 aa  114  5e-25  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  46.02 
 
 
520 aa  114  5e-25  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
519 aa  114  6e-25  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  52.94 
 
 
529 aa  114  6.9999999999999995e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  51.96 
 
 
520 aa  114  6.9999999999999995e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.94 
 
 
522 aa  114  6.9999999999999995e-25  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1652  putative PAS/PAC sensor protein  44.88 
 
 
127 aa  114  7.999999999999999e-25  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.129926  n/a   
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  45.69 
 
 
716 aa  114  7.999999999999999e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  50 
 
 
522 aa  114  7.999999999999999e-25  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.96 
 
 
522 aa  114  7.999999999999999e-25  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.96 
 
 
522 aa  114  7.999999999999999e-25  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  50.49 
 
 
532 aa  114  8.999999999999998e-25  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.89 
 
 
516 aa  114  8.999999999999998e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  45.28 
 
 
521 aa  113  1.0000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.26 
 
 
853 aa  113  1.0000000000000001e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  44.29 
 
 
520 aa  113  1.0000000000000001e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  49.51 
 
 
531 aa  113  2.0000000000000002e-24  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
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