More than 300 homologs were found in PanDaTox collection
for query gene Jden_2233 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_2233  putative PAS/PAC sensor protein  100 
 
 
177 aa  364  1e-100  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.17522 
 
 
-
 
NC_013521  Sked_05500  PAS domain S-box  52.3 
 
 
194 aa  195  2.0000000000000003e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.414164  normal 
 
 
-
 
NC_013512  Sdel_0368  PAS sensor protein  49.36 
 
 
168 aa  161  4.0000000000000004e-39  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.580475  n/a   
 
 
-
 
NC_007298  Daro_4009  PAS  43.9 
 
 
172 aa  160  7e-39  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2378  transcriptional regulator  47.56 
 
 
174 aa  160  1e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4662  putative PAS/PAC sensor protein  46.2 
 
 
168 aa  158  3e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.193201 
 
 
-
 
NC_011004  Rpal_4683  putative PAS/PAC sensor protein  46.2 
 
 
173 aa  157  8e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1393  methyl-accepting chemotaxis sensory transducer  46.06 
 
 
182 aa  157  9e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.959449 
 
 
-
 
NC_009664  Krad_3403  PAS sensor protein  42.86 
 
 
189 aa  156  1e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.263742  normal  0.531721 
 
 
-
 
NC_007778  RPB_1413  putative PAS/PAC sensor protein  46.06 
 
 
185 aa  153  1e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.026067  normal 
 
 
-
 
NC_011004  Rpal_4792  putative PAS/PAC sensor protein  42.68 
 
 
174 aa  150  7e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4975  putative PAS/PAC sensor protein  42.44 
 
 
178 aa  149  1e-35  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.161434  n/a   
 
 
-
 
NC_007778  RPB_1071  putative PAS/PAC sensor protein  43.6 
 
 
178 aa  149  2e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3464  transcriptional regulator  42.07 
 
 
174 aa  148  3e-35  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1312  putative PAS/PAC sensor protein  41.72 
 
 
174 aa  147  5e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.723682  normal  0.171791 
 
 
-
 
NC_012039  Cla_0964  putative PAS domain signal transduction sensor protein  43.9 
 
 
163 aa  147  1.0000000000000001e-34  Campylobacter lari RM2100  Bacteria  normal  0.695373  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0920  putative PAS/PAC sensor protein  44.31 
 
 
170 aa  146  1.0000000000000001e-34  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1323  methyl-accepting chemotaxis protein  40.12 
 
 
165 aa  142  2e-33  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4977  putative PAS/PAC sensor protein  52.63 
 
 
177 aa  142  2e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.13761  n/a   
 
 
-
 
NC_008787  CJJ81176_1204  methyl-accepting chemotaxis protein  40.12 
 
 
165 aa  142  2e-33  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1206  methyl-accepting chemotaxis protein  40.96 
 
 
164 aa  142  2e-33  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1233  methyl-accepting chemotaxis protein  40 
 
 
166 aa  142  2e-33  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3908  methyl-accepting chemotaxis sensory transducer  41.51 
 
 
174 aa  142  3e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0044  putative PAS/PAC sensor protein  39.88 
 
 
162 aa  141  5e-33  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1325  methyl-accepting chemotaxis protein  39.76 
 
 
164 aa  138  3.9999999999999997e-32  Campylobacter jejuni RM1221  Bacteria  normal  0.0735034  n/a   
 
 
-
 
NC_009707  JJD26997_0540  methyl-accepting chemotaxis protein  39.29 
 
 
166 aa  137  4.999999999999999e-32  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1962  methyl-accepting chemotaxis protein  42.68 
 
 
166 aa  137  7e-32  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0963  putative PAS domain signal transduction sensor protein  38.41 
 
 
163 aa  137  1e-31  Campylobacter lari RM2100  Bacteria  normal  0.598174  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.21 
 
 
521 aa  133  9.999999999999999e-31  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  43.61 
 
 
521 aa  132  1.9999999999999998e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  47.2 
 
 
521 aa  132  1.9999999999999998e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_013512  Sdel_0158  PAS sensor protein  38.92 
 
 
170 aa  132  1.9999999999999998e-30  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00559927  n/a   
 
 
-
 
NC_008599  CFF8240_1012  methyl-accepting chemotaxis protein  40.35 
 
 
171 aa  131  5e-30  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.63093  n/a   
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
521 aa  131  5e-30  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  48.41 
 
 
521 aa  130  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  41.22 
 
 
419 aa  130  1.0000000000000001e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  48.41 
 
 
534 aa  129  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.2 
 
 
521 aa  127  8.000000000000001e-29  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  44.67 
 
 
565 aa  125  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
515 aa  125  4.0000000000000003e-28  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  47.93 
 
 
714 aa  122  2e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_009714  CHAB381_1223  signal-transduction sensor protein  39.18 
 
 
189 aa  122  3e-27  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.658782  n/a   
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
522 aa  121  5e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  42.42 
 
 
521 aa  121  7e-27  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
520 aa  120  7e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  45.08 
 
 
538 aa  120  9.999999999999999e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  47.83 
 
 
524 aa  120  9.999999999999999e-27  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  41.18 
 
 
521 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  41.18 
 
 
521 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.2 
 
 
524 aa  119  1.9999999999999998e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
521 aa  118  3e-26  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  41.79 
 
 
521 aa  118  3e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.74 
 
 
523 aa  119  3e-26  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.75 
 
 
521 aa  118  3.9999999999999996e-26  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.44 
 
 
521 aa  118  3.9999999999999996e-26  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_007005  Psyr_3406  PAS  40.3 
 
 
521 aa  117  7e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.44 
 
 
716 aa  117  7.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  42.62 
 
 
521 aa  117  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.55 
 
 
521 aa  116  9.999999999999999e-26  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_013422  Hneap_1291  PAS sensor protein  40.52 
 
 
184 aa  117  9.999999999999999e-26  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.18 
 
 
556 aa  117  9.999999999999999e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
521 aa  116  1.9999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  42.18 
 
 
557 aa  116  1.9999999999999998e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.33 
 
 
566 aa  116  1.9999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.53 
 
 
598 aa  116  1.9999999999999998e-25  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
521 aa  115  1.9999999999999998e-25  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_007298  Daro_0223  PAS  44.78 
 
 
1214 aa  115  3e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  40.56 
 
 
524 aa  115  3e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  43.08 
 
 
945 aa  115  3.9999999999999997e-25  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.44 
 
 
529 aa  115  3.9999999999999997e-25  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.44 
 
 
529 aa  115  3.9999999999999997e-25  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  39.69 
 
 
521 aa  114  5e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.35 
 
 
523 aa  114  5e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.94 
 
 
521 aa  114  6e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.74 
 
 
543 aa  114  6e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.73 
 
 
551 aa  114  6.9999999999999995e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  40.58 
 
 
522 aa  114  7.999999999999999e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  44.44 
 
 
529 aa  114  8.999999999999998e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_012560  Avin_24380  aerotaxis receptor Aer  40.94 
 
 
567 aa  114  8.999999999999998e-25  Azotobacter vinelandii DJ  Bacteria  normal  0.0650163  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.46 
 
 
550 aa  113  1.0000000000000001e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
532 aa  114  1.0000000000000001e-24  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
532 aa  113  2.0000000000000002e-24  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  43.22 
 
 
716 aa  112  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.26 
 
 
522 aa  113  2.0000000000000002e-24  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.24 
 
 
853 aa  112  2.0000000000000002e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.1 
 
 
527 aa  113  2.0000000000000002e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.72 
 
 
566 aa  112  3e-24  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
522 aa  112  3e-24  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
522 aa  112  3e-24  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_007963  Csal_2022  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.35 
 
 
748 aa  112  3e-24  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.77 
 
 
552 aa  112  3e-24  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  46.02 
 
 
523 aa  112  4.0000000000000004e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  45.97 
 
 
529 aa  112  4.0000000000000004e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.52 
 
 
522 aa  111  5e-24  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  47.46 
 
 
549 aa  111  5e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.41 
 
 
579 aa  111  6e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.53 
 
 
524 aa  111  6e-24  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  39.22 
 
 
517 aa  111  7.000000000000001e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.8 
 
 
954 aa  110  7.000000000000001e-24  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
522 aa  110  9e-24  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
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