| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4977 |
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| Symbol | |
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| ID | 6412669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5357104 |
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| End bp | 5357637 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714860 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001993941 |
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| Protein GI | 192293336 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.13761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCACG TCACGCCGAG CGGACGGGAG GCCTTCTTCC CAGCTTCTGA ATTGATCGTC
TCCAAGACCG ACACCAAAGG GCGGCTGACT TACGCCAACC GCCTGTTCTG CGATGTCGCC
GGCTACAGCG AGGCCGAGCT GATCGGCCAG CCGCACAACG TCATCCGCCA TCCCGATATG
CCGCGCGCGG TGTTCAAGCT GCTGTGGGAC GCCGTGCAGC AGGGCCGCGA GATCTTCGCC
TATGTGAAGA ATATGACGCG CAACGGCGAC CACTATTGGG TGTTCGCGCA CGTCACGCCG
TCGTTCGACG GTGCGGGGCG GATCGTCGGC TATCACTCCA ACCGGCGCGC GCCGGATCGC
GGCGTGCTCG AAGGCGCGAT CATCCCGCTC TACGCCGACA TCCTCCGCAC CGAGCGTAGC
CACCGCAACG CCAAAGACGC GTTGTCCGCC GGCTCTCTCG CGCTGTCCGA TTTCGTCGCT
TCCCGGAAGG CCTCCTATGA CGAACTTATG TTCTCTCTCA AGAGCGCGGC TTAA
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| Protein sequence | MRHVTPSGRE AFFPASELIV SKTDTKGRLT YANRLFCDVA GYSEAELIGQ PHNVIRHPDM
PRAVFKLLWD AVQQGREIFA YVKNMTRNGD HYWVFAHVTP SFDGAGRIVG YHSNRRAPDR
GVLEGAIIPL YADILRTERS HRNAKDALSA GSLALSDFVA SRKASYDELM FSLKSAA
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