| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0223 |
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| Symbol | |
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| ID | 3569615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 244573 |
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| End bp | 248217 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637678661 |
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| Product | PAS |
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| Protein accession | YP_283452 |
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| Protein GI | 71905865 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATA ACGGTGCGGT AAGCGGCAAA GAGATCGAAC TACGGGATGA TCAACTGATC
ATTTCCCGGA CGGACAATCA AGGCCGCATC GTTTACGTCA ATCCCGACTT CATCGAAATC
AGTGGCTTCT CCGAGGCGGA ACTCATCGGT CAGCCCCACA ATATGATTCG GCATCCTGAC
ATGCCGCCCG AAGTCTTTGC CGATCTGTGG CGAGACCTCA GGGCGGGGCG CCCCTGGATC
GGCCTGATCA AAAATCGCTG CAAGAATGGC GATGCCTACT GGGTCGAAGC CCATGTTTCC
CCAATATGGG ACAAGGATGA AATATCCGGC TACATGTCCA TGCGCCGAAA GGCCAGCAGA
GGCGAGATTC AGGCGGCTGA ACAGACCTAT GCGGCAATGC AAAAGGATGC CGACAATGCA
CCGATTTTTG AACACGGCGC AGCGAGCCAG CGCAAACCCT GGCGATCCCT GCACAACGCT
TTCAGCAATG CCCCGCTCGC CATCAAGTTC ATCCTCGCGT CGCTGACCGC AGCGGCGCTG
GTTCTTGGCC TGACCACTTA TTTCCTGGCC AGCCATGTCT CCCGTACGCT GGATGAAAAT
GCCCGAAATC AGCTGAAACA CGACGTCAGC CTGCTTCGTG CGGCAGTTTC CGCTCGCGTT
GAAGGCGCCA ATATAGAAGC CGTTGAATAC TCCAAGGTGC TGGCCAAACG AGTCTACGCC
GCCATCGGTG GCCAGAAGAA TGCCAGTCGC CAGTCCCTCG AGGCCATGAT CGAGAAAATG
AGCGCCTCCC CCGGCAATCC GATTGATATC TTCCTGCACG ACTTGCGCGG TGTCGGCACC
ATCTTCATCC TGACCCCAGA GGGCTTCCAG CGTCGCATGA CAACCGCGGT TGACGACCAT
GGCGGCTCCC CGGTTGGCTC CTACCTCACC ACCGACCACC CAGCCTATCT GCAGCTGTCT
GCTGGCCAAA CCTTTGTCGG TCCGGCCCGG GTTTTTAACC GCCAGTATGT CACCCGCTAC
ACGCCCATCC TCGATGCCCA AGGGACAGTG GTGGGCGCCA CCGTCATCGG TATCGACATC
GGTGAGCAAC TGGACACCCT GAAGCGACAA ATACGCTCGA TGCAGGTGGG TGAAACCGGT
TATTACTACA TTGTCGATAC CACGCCGGGA GCAAATTTCG GCACTCTGAT CCTCCACCCT
TACAAGGAAG GGCAAGGCCT CGCGAATTTC CGCATGGATA ACGGCAAGGG ACTGATTGAG
GAAATGGCCA GAATCGGCAC CGGCGAAATT TCGTACCGCT GGAAAAATGA AGAGGCGGGA
GAGGTCGTTG CCCGAAAGAA ACTGGTCATC TTCGAAACCC TGGATGAGCC CAAGTGGACC
GTTGCTGGTG GCACTTCCGT CGATGAGTTC ACCGCCCTGT CCGACCGTAT CGTCTGGCTG
GTCATCGCTG GAGGACTGGC CATGGCCACC ACTATTTTCG TCATTATCCT GATTTTGCTC
CGCAAGTTGA TTCTGAACCC GCTGAACAGC CAGGTACTAC CCACATTTCA CGCCATTTCA
GCCGGGCATT TCGACACCGC GCTCGATGTT CGTGGCAATG ATGAAATGGC CCAGGTTGTC
CAGGGGCTGG AATCCCTGCG CAACCGCCTG GCCTACAACA ACGAACGTGA GCGCACACTC
TCTGCCATGC GCGAACTTGC TCGCCAGGAA GCAGAAGGCC TTGCCCGGGC CCGAGCAGAA
TTCCTGGCCA ACATGAGCCA CGAAATCCGC ACGCCGTTGA ACGCCGTGAT CGGACTTGCC
TATCTGCTGC TGCAGAACAA ATTGGGCGAG CGCGAGATGG AGTACGTCAA ACGCATTGAA
GGGGCTGGCA AACTGCTGCT GGCCATCGTC AATGACGTGC TGGATTTCTC AAAAATCGAC
GCCGGTAAAA TGCAGTTGGA GGAAAGCTCA TTCCAACTCG ATGACTTGCT CGACAACCTG
TCGAGCCTGG TCCGTACCCG AGCCCAGGAA AAAAATCTGG TCCTCGAATA TGTCGTTGCC
CCTGACGCCA CACAGAATCT CCGTGGCGAT GCCCTTCGTC TGTCGCAGAT ACTGATTAAC
CTGGTCAGCA ACGCCATCAA GTTCACGGCC GAAGGTTCGA TCACCGTATT CATTGATGTC
GCATCGAATA AGGACAACCG GATTGAACTC GAGTTCCGCA TCCAGGATAC CGGCATCGGC
ATGTCGGCCG AACAAACTGA TAACCTGTTC CGGGCTTTTT CGCAGGCGGA TAGTTCCGTT
ACCCGAAAAT TTGGCGGTAC CGGGCTTGGC TTGGCCATCA GCAAGCGACT GATCGAAATG
ATGGGTGGCA CCATCTGGGC CCACAGCGTC CCGCAAGTTG GCTCCACTTT CTCGTTCCGC
GTCTGGCTGG GGATCGATGA AACGAAACCG GAAGTACTCC GAAAAGTCGG CTATCACGTC
CTGGTCGTCG ACGACAACAA CCTGGCGAGG AGCGTCCTGA GCAGCCTGCT GAAAAAACAT
GGCTGCACCG TTCTGGCTGC GGAATCTGGA GAAGCAGCCC TCGCCGCGCT TCATGCATCG
GCCATGACAT CGTTCGACTG CATCATGGTC GATCTGAACA TGCCGGATAT GGACGGCCTG
GCTCTAGCCC AGCACATCCG CTCTGAACGA GGGCAATCGA CAAAGCTGAT CATGGTCACC
GGAGAAAACG TACACAGCTC CCGTTATCGC CATGCTCTGG GAGATTTTGA CGCCATTGTT
GAAAAACCGG TCACCGCCGC GCGGATCGGC GAAGTGCTGG CCCATCTGGA AGACGACGCA
CCACCCCGGC GACCAGCCAC ACTGCTTCCG GTCCCTGCCG CACCACTCTC CGGCTTGCGC
ATTCTGGTCG CCGAAGACGT GCCGACCAAC CAGTTGATCA TGCGCGACCT GCTCGAATCA
CTGGGCGCCA CTGTCGAGAT GGCAGACAAT GGCGAACAGG CCATCGAGCA GCTTGCTGCA
GCGGGCGACG ACATCGACCT GATCCTGATG GATATCCAGA TGCCGGAAAT GGACGGCCTG
GAAGCCACCC ACCGCATCCG GACCGGGCAG AAACGCGCCA ACATTCCGAT TATCGCCCTG
ACCGCGCACG CCCTTGAAGA AGAACGACAA CGCGCCGCCG CCTCGGGTAT GAACGACTTC
CTGACCAAAC CCATAGAGCC AGCCAACCTG ATCAATGTGA TCCAGCGCTG GCGACCAACG
CCGGTCAGGG CTGAAACAAC CGCTCCCGCT CCGCTCCAGG CGGTGAAGCC GATCCAGATT
CCGGACATTC CCGGCATAGA TGTGACGGCC GGCCTGCACC GCATGCTCAA TCGGCCAGCC
TTGTACGAAA AAGTGCTGCG CGACTTCCAT ACCCGCTTCA TCGGCGAGGC TGATCGCATA
CGCTCCGCAC TGGCTTCAGA AGAAACGGTC AGCGCCGCCC GCGGCGCACA TAGCCTGAAG
GGCACCGGCG GCATGATAGG CGCCAATACG CTGGCCGCCA TTGCAGCAGA ACTGGAACAG
GCCATCACGA CGGGCAGCCC TGATATCTCA GCGGACCTGG AGCGCTTCGA GAAAGAACTG
AACCGCGTCC TCGACGGGGT CAAGTCGGCA TTCAATATTG CTTAG
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| Protein sequence | MRNNGAVSGK EIELRDDQLI ISRTDNQGRI VYVNPDFIEI SGFSEAELIG QPHNMIRHPD
MPPEVFADLW RDLRAGRPWI GLIKNRCKNG DAYWVEAHVS PIWDKDEISG YMSMRRKASR
GEIQAAEQTY AAMQKDADNA PIFEHGAASQ RKPWRSLHNA FSNAPLAIKF ILASLTAAAL
VLGLTTYFLA SHVSRTLDEN ARNQLKHDVS LLRAAVSARV EGANIEAVEY SKVLAKRVYA
AIGGQKNASR QSLEAMIEKM SASPGNPIDI FLHDLRGVGT IFILTPEGFQ RRMTTAVDDH
GGSPVGSYLT TDHPAYLQLS AGQTFVGPAR VFNRQYVTRY TPILDAQGTV VGATVIGIDI
GEQLDTLKRQ IRSMQVGETG YYYIVDTTPG ANFGTLILHP YKEGQGLANF RMDNGKGLIE
EMARIGTGEI SYRWKNEEAG EVVARKKLVI FETLDEPKWT VAGGTSVDEF TALSDRIVWL
VIAGGLAMAT TIFVIILILL RKLILNPLNS QVLPTFHAIS AGHFDTALDV RGNDEMAQVV
QGLESLRNRL AYNNERERTL SAMRELARQE AEGLARARAE FLANMSHEIR TPLNAVIGLA
YLLLQNKLGE REMEYVKRIE GAGKLLLAIV NDVLDFSKID AGKMQLEESS FQLDDLLDNL
SSLVRTRAQE KNLVLEYVVA PDATQNLRGD ALRLSQILIN LVSNAIKFTA EGSITVFIDV
ASNKDNRIEL EFRIQDTGIG MSAEQTDNLF RAFSQADSSV TRKFGGTGLG LAISKRLIEM
MGGTIWAHSV PQVGSTFSFR VWLGIDETKP EVLRKVGYHV LVVDDNNLAR SVLSSLLKKH
GCTVLAAESG EAALAALHAS AMTSFDCIMV DLNMPDMDGL ALAQHIRSER GQSTKLIMVT
GENVHSSRYR HALGDFDAIV EKPVTAARIG EVLAHLEDDA PPRRPATLLP VPAAPLSGLR
ILVAEDVPTN QLIMRDLLES LGATVEMADN GEQAIEQLAA AGDDIDLILM DIQMPEMDGL
EATHRIRTGQ KRANIPIIAL TAHALEEERQ RAAASGMNDF LTKPIEPANL INVIQRWRPT
PVRAETTAPA PLQAVKPIQI PDIPGIDVTA GLHRMLNRPA LYEKVLRDFH TRFIGEADRI
RSALASEETV SAARGAHSLK GTGGMIGANT LAAIAAELEQ AITTGSPDIS ADLERFEKEL
NRVLDGVKSA FNIA
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