Gene Hneap_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1291 
Symbol 
ID8534445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand+ 
Start bp1396563 
End bp1397117 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content52% 
IMG OID646383681 
ProductPAS sensor protein 
Protein accessionYP_003263173 
Protein GI261855890 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCCA TGGGATTCAA TCCGTCCATC GACGTTACAC AAGTAACCAA TAAAGCCATA 
GAACTTGGTT CACATCGCGC ACTGCAATCG AAGACCGATC TTCAGGGCAT CATCACGCAC 
GCAAGTCGCT CTTTAGCAGA CATCTCCGGT TTTACCGTAG ATGAGCTGAT CGGCCAACCC 
CATAATATTT TGCGCCATCC GGCCATGCCC GACGCCGTTT ACTACTTGAT GTGGCAAAAA 
ATCCGGATGG GTGAAGAGTT CTACGGCATC GTGAAAAATC GCTGCAAGAA TGGCGACCAT 
TACTGGGTAA TGACACGCGT AGCGCCCGTC ATCGAGAATG GCGCTCCCGT AGGTTACACA 
TCGGCCAGAT TCACCCCACG CACCGAGCTC GTCCCCATGT GGGAAGAACT CTTCGCGAAG 
ATGCGGGACG CCGAAAACGG CAGTGGCTTC AATGACGAAC GCCGTTTCAA GCCGGCACAC 
GATATCTTGT GCAAACTGGT TCAACGAAAA GGCTATAACG ATCTGAGCCA GCTTGTGTTA 
TCTCAACGCG TCTAA
 
Protein sequence
MLSMGFNPSI DVTQVTNKAI ELGSHRALQS KTDLQGIITH ASRSLADISG FTVDELIGQP 
HNILRHPAMP DAVYYLMWQK IRMGEEFYGI VKNRCKNGDH YWVMTRVAPV IENGAPVGYT 
SARFTPRTEL VPMWEELFAK MRDAENGSGF NDERRFKPAH DILCKLVQRK GYNDLSQLVL 
SQRV