Gene Fjoh_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2936 
Symbol 
ID5091552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp3479728 
End bp3480333 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content35% 
IMG OID644742367 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001195276 
Protein GI146300685 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.178135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACTA GATTTACCCG CCCAACTCCA TCAGACCGAG AAGTCGATTG GAATAAAAAT 
AAAGTATTAC TAAGTAAAAC AGATAAGCAC GGAACAATTC TATATGCCAA CGAAGATTTT 
ATAGATGTTT CCGGATATGA TGAATTTGAA CTTATTGGAC AGCCTCACAG TATTGTGAGG 
CATCCTGATA TGCCAAAAGT AATTTTTAAG TTCTTGTGGG ATAGCATTAA ATCAAGTGAA 
AACATTCATG TAATTATTAA AAATATGGCC AAAACAGGCC GTTATTACTG GGTTGTAACC 
GACTTTAAAA TTGTAGCCGA TACAAATGGA GACGGTGATA TAGTTGGATA TTTCGGAACC 
CGAAAATCTG TTCCTGAACC TATAATTACA AAATTCATTG AACCTTTGTA TAAAAAACTG 
CTGCAAATTG AGCAGACCAG CGGGATAATA GCCTCTGAGG AATATTTGGT TGGTTTTTTA 
GAAGAACGCA AGAAAACCTA TATGGAATAT GTAGATCATT TAATTGCGAC CGGAAAAGAC 
GATAAAAATA AAGTAAGTAA GGGTTTATTC AGCGGATTAT TTGATAAAAC ACCTCCTAAA 
AAATAA
 
Protein sequence
MDTRFTRPTP SDREVDWNKN KVLLSKTDKH GTILYANEDF IDVSGYDEFE LIGQPHSIVR 
HPDMPKVIFK FLWDSIKSSE NIHVIIKNMA KTGRYYWVVT DFKIVADTNG DGDIVGYFGT 
RKSVPEPIIT KFIEPLYKKL LQIEQTSGII ASEEYLVGFL EERKKTYMEY VDHLIATGKD 
DKNKVSKGLF SGLFDKTPPK K