Gene Fjoh_2525 details

Gene Information

• Locus tag: Fjoh_2525
• ID: 5091979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 3009488
• End bp: 3010114
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 644741953
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_001194871
• Protein GI: 146300280
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0659487
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAAG AAAATCAACT TCGAACACCA GTTACAGTTA TTGATAAAGA AGTTACTTGG 
GATAAAACGC AGGTAATTAT GAGCAAAACA AATGCTTTTG GTATTATTGA ATATGCCAAT 
GAAGTTTTTG TTGACGTTTG TGGTTACGAA GATTATGAGT TAATGGGACA GCCGCATAAC 
ATTATTCGTC ATCCGGATAT GCCAAAAGTT ATTTTTAAAG TCCTGTGGGA AAATCTTAAA 
AACGGAAAAA ACTTTCATGC AATAGTAAAA AACTTAGCTA AATCTGGAAG ATACTATTGG 
GTTATAACTG ACTTTGATAT CGCCAGAGAC GAAAATGGAG TTATTGTAAA CTACTTTGGA 
AGAAGACAAG CCGTTCCGCA AGAGGTTGTT ACAATGCATA TTGAACCATT ATATAAAAAA 
CTGCTTCAAA TTGAAGCAGC AAGCGGAGTA GAATTTAGTG AAAAATACCT AATAGGTTTC 
TTAGAAGAAA AAAAGAGAAC TTATGTAGAA TATATTAAAG AGTTAATTTT TGAGCACGAA 
AAAGCACAAG CAAAATTTGC TCATTATGAA GAAGAACAAG ATACTGAAGA ACACAAAGGT 
TTTTTCAGCA GATTATTTAA TAGATAG 

 

Protein sequence

MNQENQLRTP VTVIDKEVTW DKTQVIMSKT NAFGIIEYAN EVFVDVCGYE DYELMGQPHN 
IIRHPDMPKV IFKVLWENLK NGKNFHAIVK NLAKSGRYYW VITDFDIARD ENGVIVNYFG 
RRQAVPQEVV TMHIEPLYKK LLQIEAASGV EFSEKYLIGF LEEKKRTYVE YIKELIFEHE 
KAQAKFAHYE EEQDTEEHKG FFSRLFNR