More than 300 homologs were found in PanDaTox collection
for query gene Bxe_B2007 on replicon NC_007952
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007952  Bxe_B2007  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
388 aa  800    Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.000116465  normal  0.0324755 
 
 
-
 
NC_010676  Bphyt_4751  response regulator receiver sensor signal transduction histidine kinase  90.89 
 
 
384 aa  703    Burkholderia phytofirmans PsJN  Bacteria  normal  0.0259995  normal  0.0850645 
 
 
-
 
NC_007347  Reut_A2813  response regulator receiver sensor signal transduction histidine kinase  61.39 
 
 
377 aa  461  9.999999999999999e-129  Ralstonia eutropha JMP134  Bacteria  normal  0.963287  n/a   
 
 
-
 
NC_007973  Rmet_2950  response regulator receiver sensor signal transduction histidine kinase  61.02 
 
 
378 aa  456  1e-127  Cupriavidus metallidurans CH34  Bacteria  normal  0.37884  normal 
 
 
-
 
NC_010682  Rpic_2976  response regulator receiver sensor signal transduction histidine kinase  52.42 
 
 
368 aa  352  8.999999999999999e-96  Ralstonia pickettii 12J  Bacteria  normal  0.598418  normal 
 
 
-
 
NC_012856  Rpic12D_2566  response regulator receiver sensor signal transduction histidine kinase  51.61 
 
 
369 aa  346  4e-94  Ralstonia pickettii 12D  Bacteria  normal  normal  0.236818 
 
 
-
 
NC_003295  RSc2737  two component response regulator transcription regulator protein  52.72 
 
 
374 aa  340  2e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3728  response regulator receiver sensor signal transduction histidine kinase  38.52 
 
 
395 aa  244  3e-63  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.439666  normal  0.0786529 
 
 
-
 
NC_007952  Bxe_B2691  response regulator receiver domain-containing protein  57.94 
 
 
134 aa  152  1e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1289  response regulator receiver protein  55.74 
 
 
134 aa  140  4.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.295021  normal  0.0758601 
 
 
-
 
NC_010814  Glov_3153  response regulator receiver sensor signal transduction histidine kinase  27.37 
 
 
366 aa  102  1e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2949  response regulator receiver domain-containing protein  38.78 
 
 
332 aa  102  1e-20  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0149  sensor histidine kinase/response regulator  27.93 
 
 
371 aa  101  2e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2392  response regulator receiver sensor signal transduction histidine kinase  20.48 
 
 
363 aa  100  5e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1291  response regulator receiver protein  40.14 
 
 
336 aa  99.8  7e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.127237  normal  0.0846123 
 
 
-
 
NC_007952  Bxe_B2689  response regulator receiver domain-containing protein  40.14 
 
 
339 aa  99  1e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.579235  normal 
 
 
-
 
NC_007347  Reut_A2812  response regulator receiver  39.72 
 
 
335 aa  98.6  2e-19  Ralstonia eutropha JMP134  Bacteria  normal  0.101507  n/a   
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  26.61 
 
 
379 aa  98.6  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_009483  Gura_0224  response regulator receiver sensor signal transduction histidine kinase  26.7 
 
 
379 aa  96.3  9e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1525  ATP-binding region ATPase domain protein  22.07 
 
 
359 aa  95.5  1e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  0.331233  normal  0.636632 
 
 
-
 
NC_013132  Cpin_1315  response regulator receiver sensor signal transduction histidine kinase  22.52 
 
 
365 aa  94.4  4e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  26.34 
 
 
379 aa  93.2  7e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_0202  response regulator receiver sensor signal transduction histidine kinase  27.15 
 
 
374 aa  92.8  9e-18  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_008781  Pnap_3729  response regulator receiver protein  36.05 
 
 
323 aa  91.7  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.800159  normal  0.0418103 
 
 
-
 
NC_012856  Rpic12D_2567  response regulator receiver protein  35.67 
 
 
339 aa  89.7  7e-17  Ralstonia pickettii 12D  Bacteria  normal  normal  0.342173 
 
 
-
 
NC_010682  Rpic_2977  response regulator receiver protein  38.1 
 
 
339 aa  89.7  8e-17  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2738  response regulator transcription regulator protein  38.71 
 
 
336 aa  88.6  2e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  33.6 
 
 
823 aa  85.1  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2547  response regulator receiver protein  38.06 
 
 
395 aa  85.1  0.000000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4046  periplasmic sensor signal transduction histidine kinase  26.05 
 
 
434 aa  84  0.000000000000004  Polaromonas sp. JS666  Bacteria  normal  normal  0.421947 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  30.29 
 
 
317 aa  83.2  0.000000000000008  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  30.99 
 
 
154 aa  81.3  0.00000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_3060  response regulator receiver  35.61 
 
 
410 aa  82  0.00000000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1131  response regulator receiver sensor signal transduction histidine kinase  25.65 
 
 
500 aa  80.9  0.00000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011060  Ppha_1021  putative PAS/PAC sensor protein  32.82 
 
 
564 aa  80.9  0.00000000000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1161  two component, sigma54 specific, Fis family transcriptional regulator  37.31 
 
 
496 aa  80.1  0.00000000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.175427  normal 
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  35.57 
 
 
1156 aa  80.1  0.00000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  28.78 
 
 
557 aa  79.3  0.0000000000001  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_008781  Pnap_3513  integral membrane sensor signal transduction histidine kinase  27.38 
 
 
425 aa  79.3  0.0000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.600596  normal 
 
 
-
 
NC_010571  Oter_2405  response regulator receiver sensor signal transduction histidine kinase  25.45 
 
 
383 aa  78.2  0.0000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.109691  normal 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  28.29 
 
 
154 aa  78.2  0.0000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_008312  Tery_3155  adenylate/guanylate cyclase  38.83 
 
 
1172 aa  78.6  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.386213  hitchhiker  0.00095291 
 
 
-
 
NC_013440  Hoch_0050  two component, sigma54 specific, transcriptional regulator, Fis family  32.45 
 
 
515 aa  77.8  0.0000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0532507 
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  31.62 
 
 
495 aa  77.4  0.0000000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1529  response regulator receiver  32.64 
 
 
151 aa  77.8  0.0000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.542106  normal 
 
 
-
 
NC_008312  Tery_3971  putative GAF sensor protein  29.65 
 
 
312 aa  78.2  0.0000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06089  transmembrane sensor histidine kinase  25.21 
 
 
681 aa  77.4  0.0000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0605  response regulator  30.6 
 
 
536 aa  77.4  0.0000000000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  33.59 
 
 
553 aa  77.4  0.0000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  34.29 
 
 
1180 aa  77  0.0000000000005  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_004347  SO_2539  response regulator  32.19 
 
 
658 aa  77  0.0000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  32.62 
 
 
456 aa  77  0.0000000000005  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_013173  Dbac_0913  response regulator receiver sensor hybrid histidine kinase  22.7 
 
 
544 aa  76.6  0.0000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4042  histidine kinase  29.88 
 
 
461 aa  75.9  0.000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.601424  normal 
 
 
-
 
NC_010678  Rpic_3929  integral membrane sensor signal transduction histidine kinase  29.88 
 
 
461 aa  75.9  0.000000000001  Ralstonia pickettii 12J  Bacteria  normal  0.72259  normal  0.649992 
 
 
-
 
NC_009656  PSPA7_5904  two-component sensor  29.12 
 
 
599 aa  75.9  0.000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0615  response regulator receiver sensor signal transduction histidine kinase  25.21 
 
 
395 aa  76.3  0.000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.00858549 
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  29.79 
 
 
315 aa  75.1  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  28.78 
 
 
557 aa  75.1  0.000000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2017  integral membrane sensor signal transduction histidine kinase  29.96 
 
 
422 aa  75.1  0.000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.224575  n/a   
 
 
-
 
NC_009135  MmarC5_0464  integral membrane sensor signal transduction histidine kinase  23.91 
 
 
614 aa  75.1  0.000000000002  Methanococcus maripaludis C5  Archaea  normal  0.778528  n/a   
 
 
-
 
NC_012850  Rleg_0314  histidine kinase  24.21 
 
 
531 aa  75.1  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1833  putative PAS/PAC sensor protein  32.09 
 
 
560 aa  75.1  0.000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  35.25 
 
 
806 aa  75.5  0.000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002947  PP_2942  response regulator  32.85 
 
 
456 aa  74.3  0.000000000003  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_011769  DvMF_2333  integral membrane sensor signal transduction histidine kinase  25.72 
 
 
607 aa  74.7  0.000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007512  Plut_1360  putative PAS/PAC sensor protein  33.09 
 
 
536 aa  74.7  0.000000000003  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0073  PAS/PAC sensor signal transduction histidine kinase  27.95 
 
 
505 aa  74.3  0.000000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2808  two component, sigma54 specific, Fis family transcriptional regulator  31.34 
 
 
482 aa  74.3  0.000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  24.86 
 
 
372 aa  73.6  0.000000000005  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  25.99 
 
 
382 aa  73.9  0.000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_008463  PA14_68230  two-component sensor  28.35 
 
 
612 aa  73.6  0.000000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0604681 
 
 
-
 
NC_008312  Tery_2534  cyclic nucleotide-binding protein  25.56 
 
 
367 aa  73.9  0.000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  0.809153  normal  0.0324751 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  25.08 
 
 
369 aa  73.6  0.000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_010571  Oter_2708  response regulator receiver protein  36.21 
 
 
141 aa  73.6  0.000000000006  Opitutus terrae PB90-1  Bacteria  normal  0.0523429  normal 
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  30.33 
 
 
311 aa  73.2  0.000000000008  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_009637  MmarC7_0372  integral membrane sensor signal transduction histidine kinase  24.35 
 
 
614 aa  73.2  0.000000000008  Methanococcus maripaludis C7  Archaea  normal  0.899415  normal  0.0476359 
 
 
-
 
NC_008043  TM1040_3300  response regulator receiver sensor signal transduction histidine kinase  21.23 
 
 
385 aa  73.2  0.000000000008  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1277  periplasmic sensor signal transduction histidine kinase  28.19 
 
 
630 aa  72.8  0.000000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.449456  n/a   
 
 
-
 
NC_010172  Mext_2841  ATPase domain-containing protein  25.59 
 
 
577 aa  72.4  0.00000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.274853  normal 
 
 
-
 
NC_011757  Mchl_3067  response regulator receiver sensor signal transduction histidine kinase  25.59 
 
 
577 aa  72  0.00000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.405289  normal 
 
 
-
 
NC_010814  Glov_2297  response regulator receiver protein  29.46 
 
 
136 aa  72.4  0.00000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0283  response regulator receiver sensor hybrid histidine kinase  23.96 
 
 
531 aa  72  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2388  response regulator receiver protein  31.29 
 
 
154 aa  72.8  0.00000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.319662 
 
 
-
 
NC_007953  Bxe_C0018  seriplasmic sensor signal transduction histidine kinase  24.9 
 
 
409 aa  72.4  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.702355 
 
 
-
 
NC_008043  TM1040_3371  histidine kinase  29.92 
 
 
887 aa  72.8  0.00000000001  Ruegeria sp. TM1040  Bacteria  normal  normal  0.564838 
 
 
-
 
NC_007005  Psyr_3504  GAF:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  26.71 
 
 
745 aa  71.6  0.00000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.280312  normal 
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  23.4 
 
 
417 aa  72  0.00000000002  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_007347  Reut_A0276  sensor histidine kinase  25.94 
 
 
659 aa  71.6  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0692  response regulator receiver domain-containing protein  34.11 
 
 
390 aa  72  0.00000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03496  response regulator  34.29 
 
 
434 aa  72  0.00000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2687  response regulator receiver sensor signal transduction histidine kinase  22.03 
 
 
1013 aa  71.6  0.00000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.70216  normal 
 
 
-
 
NC_007952  Bxe_B2006  periplasmic sensor hybrid histidine kinase  31.45 
 
 
852 aa  71.6  0.00000000002  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.000507491  normal  0.0782006 
 
 
-
 
NC_010814  Glov_3074  integral membrane sensor signal transduction histidine kinase  28.92 
 
 
378 aa  72  0.00000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0455  sensor histidine kinase/response regulator LuxN  30.07 
 
 
686 aa  71.6  0.00000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2722  response regulator receiver modulated metal dependent phosphohydrolase  33.09 
 
 
444 aa  71.6  0.00000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  31.82 
 
 
484 aa  72  0.00000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1902  bacteriophytochrome histidine kinase  27.51 
 
 
745 aa  71.2  0.00000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.333534  n/a   
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  37.1 
 
 
303 aa  71.2  0.00000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2061  histidine kinase  28.63 
 
 
412 aa  71.2  0.00000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000174417 
 
 
-
 
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