More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_4751 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_4751  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
384 aa  792    Burkholderia phytofirmans PsJN  Bacteria  normal  0.0259995  normal  0.0850645 
 
 
-
 
NC_007952  Bxe_B2007  response regulator receiver sensor signal transduction histidine kinase  90.89 
 
 
388 aa  727    Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.000116465  normal  0.0324755 
 
 
-
 
NC_007347  Reut_A2813  response regulator receiver sensor signal transduction histidine kinase  62.13 
 
 
377 aa  462  1e-129  Ralstonia eutropha JMP134  Bacteria  normal  0.963287  n/a   
 
 
-
 
NC_007973  Rmet_2950  response regulator receiver sensor signal transduction histidine kinase  61.46 
 
 
378 aa  460  9.999999999999999e-129  Cupriavidus metallidurans CH34  Bacteria  normal  0.37884  normal 
 
 
-
 
NC_010682  Rpic_2976  response regulator receiver sensor signal transduction histidine kinase  52.88 
 
 
368 aa  347  2e-94  Ralstonia pickettii 12J  Bacteria  normal  0.598418  normal 
 
 
-
 
NC_012856  Rpic12D_2566  response regulator receiver sensor signal transduction histidine kinase  52.88 
 
 
369 aa  342  5e-93  Ralstonia pickettii 12D  Bacteria  normal  normal  0.236818 
 
 
-
 
NC_003295  RSc2737  two component response regulator transcription regulator protein  52.45 
 
 
374 aa  337  1.9999999999999998e-91  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3728  response regulator receiver sensor signal transduction histidine kinase  38.79 
 
 
395 aa  246  4e-64  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.439666  normal  0.0786529 
 
 
-
 
NC_007952  Bxe_B2691  response regulator receiver domain-containing protein  57.26 
 
 
134 aa  145  9e-34  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1289  response regulator receiver protein  54.87 
 
 
134 aa  134  1.9999999999999998e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.295021  normal  0.0758601 
 
 
-
 
NC_007347  Reut_A2812  response regulator receiver  44.27 
 
 
335 aa  106  9e-22  Ralstonia eutropha JMP134  Bacteria  normal  0.101507  n/a   
 
 
-
 
NC_010814  Glov_3153  response regulator receiver sensor signal transduction histidine kinase  27.57 
 
 
366 aa  105  2e-21  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1291  response regulator receiver protein  41.3 
 
 
336 aa  102  9e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  0.127237  normal  0.0846123 
 
 
-
 
NC_013037  Dfer_2392  response regulator receiver sensor signal transduction histidine kinase  22.07 
 
 
363 aa  102  1e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0149  sensor histidine kinase/response regulator  27.97 
 
 
371 aa  101  3e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  25.92 
 
 
379 aa  99.8  7e-20  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_007952  Bxe_B2689  response regulator receiver domain-containing protein  40.71 
 
 
339 aa  99.4  1e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.579235  normal 
 
 
-
 
NC_007973  Rmet_2949  response regulator receiver domain-containing protein  38.19 
 
 
332 aa  98.6  2e-19  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1315  response regulator receiver sensor signal transduction histidine kinase  23.66 
 
 
365 aa  97.4  3e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1525  ATP-binding region ATPase domain protein  23.18 
 
 
359 aa  96.7  6e-19  Pedobacter heparinus DSM 2366  Bacteria  normal  0.331233  normal  0.636632 
 
 
-
 
NC_009483  Gura_0224  response regulator receiver sensor signal transduction histidine kinase  25.8 
 
 
379 aa  95.9  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2567  response regulator receiver protein  41.07 
 
 
339 aa  93.2  6e-18  Ralstonia pickettii 12D  Bacteria  normal  normal  0.342173 
 
 
-
 
NC_010682  Rpic_2977  response regulator receiver protein  41.07 
 
 
339 aa  93.2  7e-18  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  25.33 
 
 
379 aa  92.8  8e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  36.89 
 
 
823 aa  91.3  2e-17  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2738  response regulator transcription regulator protein  40.91 
 
 
336 aa  90.9  3e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0202  response regulator receiver sensor signal transduction histidine kinase  26.37 
 
 
374 aa  91.3  3e-17  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_008781  Pnap_3729  response regulator receiver protein  36.31 
 
 
323 aa  90.5  5e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.800159  normal  0.0418103 
 
 
-
 
NC_010571  Oter_2405  response regulator receiver sensor signal transduction histidine kinase  25.78 
 
 
383 aa  86.7  7e-16  Opitutus terrae PB90-1  Bacteria  normal  0.109691  normal 
 
 
-
 
NC_011769  DvMF_1131  response regulator receiver sensor signal transduction histidine kinase  26.79 
 
 
500 aa  85.5  0.000000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  30 
 
 
154 aa  84.7  0.000000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_007948  Bpro_4046  periplasmic sensor signal transduction histidine kinase  26.89 
 
 
434 aa  84  0.000000000000004  Polaromonas sp. JS666  Bacteria  normal  normal  0.421947 
 
 
-
 
NC_008312  Tery_3155  adenylate/guanylate cyclase  38.32 
 
 
1172 aa  83.6  0.000000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  0.386213  hitchhiker  0.00095291 
 
 
-
 
NC_008639  Cpha266_1833  putative PAS/PAC sensor protein  35.11 
 
 
560 aa  83.6  0.000000000000006  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2547  response regulator receiver protein  35.82 
 
 
395 aa  83.2  0.000000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0050  two component, sigma54 specific, transcriptional regulator, Fis family  32.88 
 
 
515 aa  82.8  0.000000000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0532507 
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  31.69 
 
 
154 aa  82.4  0.00000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  35.11 
 
 
553 aa  80.9  0.00000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2017  integral membrane sensor signal transduction histidine kinase  31.08 
 
 
422 aa  80.5  0.00000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.224575  n/a   
 
 
-
 
NC_011060  Ppha_1021  putative PAS/PAC sensor protein  34.38 
 
 
564 aa  80.1  0.00000000000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0018  seriplasmic sensor signal transduction histidine kinase  26.34 
 
 
409 aa  80.5  0.00000000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.702355 
 
 
-
 
NC_011884  Cyan7425_4555  response regulator receiver sensor signal transduction histidine kinase  26.11 
 
 
406 aa  80.5  0.00000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  0.330139  normal  0.677797 
 
 
-
 
NC_014148  Plim_3060  response regulator receiver  34.03 
 
 
410 aa  80.1  0.00000000000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  26.33 
 
 
374 aa  80.1  0.00000000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_010581  Bind_1161  two component, sigma54 specific, Fis family transcriptional regulator  38.39 
 
 
496 aa  79.7  0.00000000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.175427  normal 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  30.63 
 
 
317 aa  79.7  0.00000000000007  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  31.06 
 
 
557 aa  79.7  0.00000000000007  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  36.43 
 
 
1156 aa  79.7  0.00000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  36.07 
 
 
806 aa  79.7  0.00000000000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004347  SO_2539  response regulator  32.88 
 
 
658 aa  79.3  0.00000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007348  Reut_B4539  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  27.7 
 
 
1152 aa  79.3  0.00000000000009  Ralstonia eutropha JMP134  Bacteria  normal  0.329946  n/a   
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  27 
 
 
557 aa  79.3  0.0000000000001  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_012918  GM21_2061  histidine kinase  29.92 
 
 
412 aa  79  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000174417 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  33.79 
 
 
456 aa  79.3  0.0000000000001  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_011769  DvMF_2333  integral membrane sensor signal transduction histidine kinase  27.08 
 
 
607 aa  78.2  0.0000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_3513  integral membrane sensor signal transduction histidine kinase  27.73 
 
 
425 aa  78.6  0.0000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.600596  normal 
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  31.15 
 
 
311 aa  78.6  0.0000000000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_002947  PP_2942  response regulator  33.81 
 
 
456 aa  77.8  0.0000000000003  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  25.79 
 
 
369 aa  77.8  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  32.56 
 
 
1180 aa  77.8  0.0000000000003  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_007512  Plut_1360  putative PAS/PAC sensor protein  33.81 
 
 
536 aa  77  0.0000000000005  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1529  response regulator receiver  32.64 
 
 
151 aa  77  0.0000000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.542106  normal 
 
 
-
 
NC_011146  Gbem_2161  integral membrane sensor signal transduction histidine kinase  27.95 
 
 
412 aa  76.6  0.0000000000006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06089  transmembrane sensor histidine kinase  25.63 
 
 
681 aa  76.6  0.0000000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_0314  histidine kinase  23.2 
 
 
531 aa  76.6  0.0000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2534  cyclic nucleotide-binding protein  24.33 
 
 
367 aa  76.6  0.0000000000006  Trichodesmium erythraeum IMS101  Bacteria  normal  0.809153  normal  0.0324751 
 
 
-
 
NC_008312  Tery_3971  putative GAF sensor protein  30.06 
 
 
312 aa  76.6  0.0000000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  30.88 
 
 
495 aa  76.3  0.0000000000008  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  25.4 
 
 
372 aa  76.6  0.0000000000008  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  31.01 
 
 
486 aa  76.3  0.000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_007517  Gmet_0696  histidine kinase  27.98 
 
 
248 aa  75.5  0.000000000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0073771  normal 
 
 
-
 
NC_009439  Pmen_0172  response regulator receiver sensor signal transduction histidine kinase  25.94 
 
 
395 aa  75.5  0.000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2808  two component, sigma54 specific, Fis family transcriptional regulator  33.6 
 
 
482 aa  75.1  0.000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1832  putative PAS/PAC sensor protein  31.01 
 
 
543 aa  74.7  0.000000000002  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3472  response regulator receiver sensor signal transduction histidine kinase  33.12 
 
 
520 aa  75.1  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  30.88 
 
 
484 aa  75.5  0.000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  22.36 
 
 
396 aa  74.3  0.000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  26.26 
 
 
382 aa  74.7  0.000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_009656  PSPA7_5904  two-component sensor  29.34 
 
 
599 aa  74.3  0.000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4042  histidine kinase  30.67 
 
 
461 aa  74.3  0.000000000004  Ralstonia pickettii 12D  Bacteria  normal  0.601424  normal 
 
 
-
 
NC_007204  Psyc_0720  response regulator receiver, fis type  30.33 
 
 
312 aa  73.9  0.000000000004  Psychrobacter arcticus 273-4  Bacteria  normal  0.935409  normal 
 
 
-
 
NC_013132  Cpin_2687  response regulator receiver sensor signal transduction histidine kinase  23.41 
 
 
1013 aa  74.3  0.000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.70216  normal 
 
 
-
 
NC_010678  Rpic_3929  integral membrane sensor signal transduction histidine kinase  30.67 
 
 
461 aa  74.3  0.000000000004  Ralstonia pickettii 12J  Bacteria  normal  0.72259  normal  0.649992 
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  25.86 
 
 
438 aa  73.9  0.000000000005  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0283  response regulator receiver sensor hybrid histidine kinase  22.8 
 
 
531 aa  73.6  0.000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  29.51 
 
 
270 aa  73.6  0.000000000005  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  22.25 
 
 
396 aa  73.9  0.000000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_007760  Adeh_1277  periplasmic sensor signal transduction histidine kinase  28.19 
 
 
630 aa  73.6  0.000000000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.449456  n/a   
 
 
-
 
NC_012791  Vapar_2317  PAS/PAC sensor signal transduction histidine kinase  27.35 
 
 
431 aa  73.9  0.000000000005  Variovorax paradoxus S110  Bacteria  normal  0.837858  n/a   
 
 
-
 
NC_013440  Hoch_5165  response regulator receiver sensor hybrid histidine kinase  25.05 
 
 
593 aa  73.6  0.000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  26.06 
 
 
381 aa  73.6  0.000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3371  histidine kinase  28.27 
 
 
887 aa  73.2  0.000000000007  Ruegeria sp. TM1040  Bacteria  normal  normal  0.564838 
 
 
-
 
NC_008609  Ppro_2722  response regulator receiver modulated metal dependent phosphohydrolase  33.09 
 
 
444 aa  73.2  0.000000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  22.41 
 
 
417 aa  73.2  0.000000000008  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_013173  Dbac_0913  response regulator receiver sensor hybrid histidine kinase  23.57 
 
 
544 aa  73.2  0.000000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2723  putative PAS/PAC sensor protein  29.03 
 
 
285 aa  72.8  0.000000000009  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0276  sensor histidine kinase  26.28 
 
 
659 aa  72.8  0.000000000009  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2841  ATPase domain-containing protein  26.38 
 
 
577 aa  72.8  0.000000000009  Methylobacterium extorquens PA1  Bacteria  normal  0.274853  normal 
 
 
-
 
NC_011757  Mchl_3067  response regulator receiver sensor signal transduction histidine kinase  26.38 
 
 
577 aa  72.8  0.000000000009  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.405289  normal 
 
 
-
 
NC_008043  TM1040_3300  response regulator receiver sensor signal transduction histidine kinase  21.5 
 
 
385 aa  72.8  0.000000000009  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
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