Gene Tery_4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4817 
Symbol 
ID4246471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7409629 
End bp7411290 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content38% 
IMG OID638109661 
Productresponse regulator receiver modulated serine phosphatase with GAF sensor 
Protein accessionYP_724237 
Protein GI113478176 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGG GAGATAGGAA ACTGAAATTG CTGGTTGTTG ATGACGAACC AGATAATTTA 
GATTTGTTGT ACAGGACGTT TAGGCGAGAT TTTAAAGTAT ATAAGGCAGA TAGTGCCTTC
ACTGCAATGG ATGTTTTAAA AGCGGAAGGA GAAATGGCAC TTATTATCTC TGACCAAAGA
ATGCCAGAAA TGAATGGTAC AGAGTTTTTA GGGAGAACCT TTGAAATATT TCCAGATACA
GTGAGAATTC TACTTACAGG CTATACAGAT GTAGAAGATT TAGTAGAAGC AATTAACTCA
GGCAAAGTAT TTAAGTATAT CACAAAACCA TGGACTCCAG AAGAACTAAA ATTAGTAGTT
CAACAAGCTT CAGAAACCTA CAAAGTGCTG AAGCAAAGAA CTAAGACTTT GACTCTGGCT
CTGCGACGAG AATCTATTTT GAATGAGGTA ATGAGTGTGA TTAGAGAATC ATTGGATTAC
TCTGATATGT TATCGACAAT AGTTAAAACA GTAGGACAAA CTTTTACAGC AACAGAAGGA
ATCTTATGGC CAGTAGCAGG CGATCGCTTA ATATCTAAGC CTGTTTCTTA TCAAAGCTCT
GAAAATACCG AGAAAAACTT TCCCATCACT GAAGAATTGT TATTGCAAGT AGTAAAAAGT
CGTCAAACCT ACTTTGAAGA AGGTTCAAAT AAAAATAGTT GCAAATTAAT AGTCCCTCTG
ATTTACCAGC AAGATTTACT GGCAGTTTTA GCCCTTAATC AACAAAACAG TAGTAATTTC
TGGTCTGATG AAGATATAAA GTTTATAGAA AGTGTGTTAG AGCAAGGAGC TTTAGCATTG
TCCCAAGCTA AACTATATCA GCGTACTAGG GAATTGGCTG AACAAATGCG TAATGAGCTA
GAAGTAGCTC GTCAAATACA AAGCAACTTA TTGCGTCAAA GTTGGCCAGA TTTTGATAAG
TTCAGGATAC AGGCTTGTTG CTATCCAGCT AGAGAAGTAG GAGGTGATTT TTTTGAAGTT
TATACTCACC CTCAAGGGGA AATATGGTTA GCATTGGGAG ATGTTTCGGG TAAGGGAGTA
CCTGCTGCGT TATTCATGGC TAGTGCTATT TCTTTGATGC GACGAGAACT TTCTCAAGAA
AATTCCCCAG AACCCTACGA AGTTATGCAC AATCTTAACA GTAGTCTTTC AGACGATCTG
ATTAGCAGTA ATTGCTTCAT TACAATGGTT TTGGCTCGTT ATACACCAGA AAATGGCTCA
TTAGCCTATG CTAATGCTGG CCATATATAT CCCTTGGTAT GGTCTAAAAA CCCATTGGTA
AATACTGGAA ACAAAGGTTC TGAGCAAGTA CCAAATTTCC TTAAAGATCG TGGTATTCCT
TTAGGAATAT TGCCAATATG GAGAGGCAAA GCAGGTACTA TAGAGTTAGA TTCAGGAGAT
GTATTCCTTT TGACTAGTGA TGGCATCACT GAAGCTACGG TAGTTCAAAA GGCTACTGAT
AGTGGGGAAG TAAGTCGTGT AATGTTGCAA CAAGAAGGTT TATGGAAACT TCTCAAGGAA
CATAAAAGCC AACTAGACCT GAATAGTTTA TTGGCTTATA TCCGAACTGA TAATCAGGTT
CAGGAAGATG ACCAAACTAT ACTATCTCTG GAGGTTCTGT GA
 
Protein sequence
MSLGDRKLKL LVVDDEPDNL DLLYRTFRRD FKVYKADSAF TAMDVLKAEG EMALIISDQR 
MPEMNGTEFL GRTFEIFPDT VRILLTGYTD VEDLVEAINS GKVFKYITKP WTPEELKLVV
QQASETYKVL KQRTKTLTLA LRRESILNEV MSVIRESLDY SDMLSTIVKT VGQTFTATEG
ILWPVAGDRL ISKPVSYQSS ENTEKNFPIT EELLLQVVKS RQTYFEEGSN KNSCKLIVPL
IYQQDLLAVL ALNQQNSSNF WSDEDIKFIE SVLEQGALAL SQAKLYQRTR ELAEQMRNEL
EVARQIQSNL LRQSWPDFDK FRIQACCYPA REVGGDFFEV YTHPQGEIWL ALGDVSGKGV
PAALFMASAI SLMRRELSQE NSPEPYEVMH NLNSSLSDDL ISSNCFITMV LARYTPENGS
LAYANAGHIY PLVWSKNPLV NTGNKGSEQV PNFLKDRGIP LGILPIWRGK AGTIELDSGD
VFLLTSDGIT EATVVQKATD SGEVSRVMLQ QEGLWKLLKE HKSQLDLNSL LAYIRTDNQV
QEDDQTILSL EVL