| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4817 |
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| Symbol | |
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| ID | 4246471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7409629 |
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| End bp | 7411290 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638109661 |
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| Product | response regulator receiver modulated serine phosphatase with GAF sensor |
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| Protein accession | YP_724237 |
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| Protein GI | 113478176 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGG GAGATAGGAA ACTGAAATTG CTGGTTGTTG ATGACGAACC AGATAATTTA
GATTTGTTGT ACAGGACGTT TAGGCGAGAT TTTAAAGTAT ATAAGGCAGA TAGTGCCTTC
ACTGCAATGG ATGTTTTAAA AGCGGAAGGA GAAATGGCAC TTATTATCTC TGACCAAAGA
ATGCCAGAAA TGAATGGTAC AGAGTTTTTA GGGAGAACCT TTGAAATATT TCCAGATACA
GTGAGAATTC TACTTACAGG CTATACAGAT GTAGAAGATT TAGTAGAAGC AATTAACTCA
GGCAAAGTAT TTAAGTATAT CACAAAACCA TGGACTCCAG AAGAACTAAA ATTAGTAGTT
CAACAAGCTT CAGAAACCTA CAAAGTGCTG AAGCAAAGAA CTAAGACTTT GACTCTGGCT
CTGCGACGAG AATCTATTTT GAATGAGGTA ATGAGTGTGA TTAGAGAATC ATTGGATTAC
TCTGATATGT TATCGACAAT AGTTAAAACA GTAGGACAAA CTTTTACAGC AACAGAAGGA
ATCTTATGGC CAGTAGCAGG CGATCGCTTA ATATCTAAGC CTGTTTCTTA TCAAAGCTCT
GAAAATACCG AGAAAAACTT TCCCATCACT GAAGAATTGT TATTGCAAGT AGTAAAAAGT
CGTCAAACCT ACTTTGAAGA AGGTTCAAAT AAAAATAGTT GCAAATTAAT AGTCCCTCTG
ATTTACCAGC AAGATTTACT GGCAGTTTTA GCCCTTAATC AACAAAACAG TAGTAATTTC
TGGTCTGATG AAGATATAAA GTTTATAGAA AGTGTGTTAG AGCAAGGAGC TTTAGCATTG
TCCCAAGCTA AACTATATCA GCGTACTAGG GAATTGGCTG AACAAATGCG TAATGAGCTA
GAAGTAGCTC GTCAAATACA AAGCAACTTA TTGCGTCAAA GTTGGCCAGA TTTTGATAAG
TTCAGGATAC AGGCTTGTTG CTATCCAGCT AGAGAAGTAG GAGGTGATTT TTTTGAAGTT
TATACTCACC CTCAAGGGGA AATATGGTTA GCATTGGGAG ATGTTTCGGG TAAGGGAGTA
CCTGCTGCGT TATTCATGGC TAGTGCTATT TCTTTGATGC GACGAGAACT TTCTCAAGAA
AATTCCCCAG AACCCTACGA AGTTATGCAC AATCTTAACA GTAGTCTTTC AGACGATCTG
ATTAGCAGTA ATTGCTTCAT TACAATGGTT TTGGCTCGTT ATACACCAGA AAATGGCTCA
TTAGCCTATG CTAATGCTGG CCATATATAT CCCTTGGTAT GGTCTAAAAA CCCATTGGTA
AATACTGGAA ACAAAGGTTC TGAGCAAGTA CCAAATTTCC TTAAAGATCG TGGTATTCCT
TTAGGAATAT TGCCAATATG GAGAGGCAAA GCAGGTACTA TAGAGTTAGA TTCAGGAGAT
GTATTCCTTT TGACTAGTGA TGGCATCACT GAAGCTACGG TAGTTCAAAA GGCTACTGAT
AGTGGGGAAG TAAGTCGTGT AATGTTGCAA CAAGAAGGTT TATGGAAACT TCTCAAGGAA
CATAAAAGCC AACTAGACCT GAATAGTTTA TTGGCTTATA TCCGAACTGA TAATCAGGTT
CAGGAAGATG ACCAAACTAT ACTATCTCTG GAGGTTCTGT GA
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| Protein sequence | MSLGDRKLKL LVVDDEPDNL DLLYRTFRRD FKVYKADSAF TAMDVLKAEG EMALIISDQR
MPEMNGTEFL GRTFEIFPDT VRILLTGYTD VEDLVEAINS GKVFKYITKP WTPEELKLVV
QQASETYKVL KQRTKTLTLA LRRESILNEV MSVIRESLDY SDMLSTIVKT VGQTFTATEG
ILWPVAGDRL ISKPVSYQSS ENTEKNFPIT EELLLQVVKS RQTYFEEGSN KNSCKLIVPL
IYQQDLLAVL ALNQQNSSNF WSDEDIKFIE SVLEQGALAL SQAKLYQRTR ELAEQMRNEL
EVARQIQSNL LRQSWPDFDK FRIQACCYPA REVGGDFFEV YTHPQGEIWL ALGDVSGKGV
PAALFMASAI SLMRRELSQE NSPEPYEVMH NLNSSLSDDL ISSNCFITMV LARYTPENGS
LAYANAGHIY PLVWSKNPLV NTGNKGSEQV PNFLKDRGIP LGILPIWRGK AGTIELDSGD
VFLLTSDGIT EATVVQKATD SGEVSRVMLQ QEGLWKLLKE HKSQLDLNSL LAYIRTDNQV
QEDDQTILSL EVL
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