| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3300 |
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| Symbol | |
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| ID | 4075703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 307142 |
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| End bp | 308299 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638004807 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_611534 |
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| Protein GI | 99078276 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGA AGAAAATGTT GATCGTCGAT GATGATGCGG GTGACCGCAA AATGATGCGA
CGCCATCTGT CCAAGCTCTA TCCGACAAAT TCCATACTCG AAGCCGAAAG CGGCGAAACA
GCGCGTTCAT TTGTCGATGA AGAAGTCGAA GTCATCTTTC TGGATTATCA ACTGCCCGAC
ATATCCGGTA TCGACTTGAT GTCCAGCTTC TTTCGCCGTT GGCCGCATTG CGTGATTTTT
ATCATGACCG GTCAGGGGGA TGAAGAGATT GCAAAAAGCG CCATCCTGAG TGGTGCCGCT
GACTATATTT CAAAATCAGC AATCACTCCT GGGGCGCTGC AAAGAATGAT CGCAAATGGC
CTTCAGGTGG CCCGGATGAA ATGGCGTATC GAGGAACACC AGAAAGAACT CCAGCAGTTT
TCGGATGTGC TCGTCCATGA CCTGCGCGCG CCTATTCGGG CGATCAAATT CCTCAGCGAT
CAGATCCTTG AGGATTTTGC AGCCGGGGAT ATGGATGAAG TCACAAGAGA ATTCGATTTG
ATGAAGAAGT CGGTCTCCAA GATGTCCGAT TTGATCGAAC GGCTTGCAAG TCACATCAAC
CCTCACAGCG AAGGCGCGCC GGAGATGATT GCGGCCGAGA GCCTTGTGGA GTCCGCTTGT
CTGGCGATCT CGCAAGACAT CGCCAATAGC GACGCGATCA TTTCTACTGA GCACAATGAC
ATAAGCGTTT CCTGCTTCCC TCCAGATATT TCTCAATTGC TTCAAAATCT TATCAGCAAT
TCGATAAAGT ATCGCAGTAA GGAGCAGCCC CAAATCGACA TCTCTGTCAA ACAGCTTAGT
TCTGGCGTTC AGTTTGCGAT TCAAGACAAT GGGATCGGCG TGCCAGAAGA GTATCGCAAA
CGCATTTTTG AACCCTTCAA GAGGCTTCAA AGAAGCAGCG ATCTGCCGGG AAGCGGGCTT
GGCCTTGCGA CCTGCGCAAA GATTGCAAAA CGCCACGATG GTGAGATCTG GTGCGATCCA
AATGTGAGTT CCGGCACCCT TATTCGATTT TCCTTGAAGC TACCGCCCCC AATGACCCTT
CCGGATCAAG AAGATGACGA GGAAGAGACG GTTGTTCCAG CTGCATTTCG GGATACCCAA
GCCCGGGCCC GTCACTGA
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| Protein sequence | MDEKKMLIVD DDAGDRKMMR RHLSKLYPTN SILEAESGET ARSFVDEEVE VIFLDYQLPD
ISGIDLMSSF FRRWPHCVIF IMTGQGDEEI AKSAILSGAA DYISKSAITP GALQRMIANG
LQVARMKWRI EEHQKELQQF SDVLVHDLRA PIRAIKFLSD QILEDFAAGD MDEVTREFDL
MKKSVSKMSD LIERLASHIN PHSEGAPEMI AAESLVESAC LAISQDIANS DAIISTEHND
ISVSCFPPDI SQLLQNLISN SIKYRSKEQP QIDISVKQLS SGVQFAIQDN GIGVPEEYRK
RIFEPFKRLQ RSSDLPGSGL GLATCAKIAK RHDGEIWCDP NVSSGTLIRF SLKLPPPMTL
PDQEDDEEET VVPAAFRDTQ ARARH
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