| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4042 |
|---|
| Symbol | |
|---|
| ID | 8021730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 616980 |
|---|
| End bp | 618365 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644832823 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002983963 |
|---|
| Protein GI | 241665604 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.601424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCCC TGTTCCCCGC CTTCGTCTCG TCGCTCTTCC TGTTCTACGG CGTCTACGTC
GTGACCACGC GCGGCCGTAC GCGTGCCAGT CTGGCGTTTC TCGGCATGAC GACACTCACG
TGCCTGTGGC AAGGCATCTG GGCGTTTCTC TTCCAGACCC ATGACATTGG CACCGCCCAG
GTGCTCGCCA AGCTCGGCTG GATTGCCATC CTCGTCATGC CGACCATGCT GTATCACTTT
GCCGTGGAGG TGGCCGAAGC GCCGAGCGAG CGGCCCTCGC TCCTGGCCGC GTATGCGCTG
GATGCCGCGC TGATCGCGTT GTTGCTGACC ACCAACCTCG TCATCGATGG TGTGCATCAG
TTCCACTTCG GTTTCTATCC GAGGGCCGGC GTGCTGGAAG CCGTGCACAT CGCCCAGACA
GTTGTGCTCG TCACGCGCGG CATGTGGGTG CTCTACCGCG AGCAGCGACA TGCCACCGCC
GAAAAGCGCA AACGGTTGCT GACGTGCCTG TTCGGCGTCG GGTTGATTTC GTTGGCGGCG
GCCGACTACG CGGTCAACTA CGGCATTGCG TTCTACCCGC CGGGTGTGCT GCCGCTGGCC
GTTGCGCTGG GCATCATCGC CGTGGGCGTG GTCAAGTTCG ACCTGATGCG CCCGTATGCA
CTGGCCGCCA CCGTTGCGCA TGAAGTACGT ACGCCGCTGA CCACCATCCG CTTGCAGGCA
GCCGAAATCG CCCGCGCCTG GCCCGACGTT TACCGCGGCT ATCAACTCGC CATCGACAAC
GGCCTGTGCC AGCCGCCGCA GCATCCGGCC ATGCTCGATC GCCTGTCCAA GCTGGCGGGT
GCCATCACGT CGGAAGTCGC GTCCGCGCAC AGCGTGATCG AAATGGCATT GGCCTCCGTC
ACGCTGGAGC GCCTCGACCG GCGCACCTTT GCGGCCCACT CGCTGCGCGA ATGCGTAGAG
ACGGCCGTGG CGCAGTATCC GTTCCAGGCC GGGGAGCGCG AACGCGTGCA CGTGCAGCCG
TTCAACGCCG ACTGGCGGTT CGTTGGCTCC GACACGCTGC TCGTGTATGT GCTGTTCAAC
CTGCTGAAGA ATGCGCTGCA TGCCATCCAG ATCGCGCGCA AGGGGCACAT CGAAATCTCC
GCCCGCCAGG ATGGCGACAG CTACGTGCTC GTGGTGCGCG ACAGCGCCAC CGGCATTCCG
CCCAGCGTGC AGCGTCGTAT CTTTGACCCG TTCTTCTCCA CCAAGCATGT CGGCAAGGGC
TCGGGCGTGG GGCTGACGTT CTGCCGCCGC GTCATGCAGG CATTCGGGGG GCGCATCCAA
TGTGAATCCG TGGTTGGGGA ATACACGCTG TTCTCCATGC GGTTTCCCCA ACCGCCTGCT
ATCTGA
|
|---|
| Protein sequence | MYALFPAFVS SLFLFYGVYV VTTRGRTRAS LAFLGMTTLT CLWQGIWAFL FQTHDIGTAQ
VLAKLGWIAI LVMPTMLYHF AVEVAEAPSE RPSLLAAYAL DAALIALLLT TNLVIDGVHQ
FHFGFYPRAG VLEAVHIAQT VVLVTRGMWV LYREQRHATA EKRKRLLTCL FGVGLISLAA
ADYAVNYGIA FYPPGVLPLA VALGIIAVGV VKFDLMRPYA LAATVAHEVR TPLTTIRLQA
AEIARAWPDV YRGYQLAIDN GLCQPPQHPA MLDRLSKLAG AITSEVASAH SVIEMALASV
TLERLDRRTF AAHSLRECVE TAVAQYPFQA GERERVHVQP FNADWRFVGS DTLLVYVLFN
LLKNALHAIQ IARKGHIEIS ARQDGDSYVL VVRDSATGIP PSVQRRIFDP FFSTKHVGKG
SGVGLTFCRR VMQAFGGRIQ CESVVGEYTL FSMRFPQPPA I
|
|---|
| |