| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0662 |
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| Symbol | |
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| ID | 3678633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 842862 |
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| End bp | 844535 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637715990 |
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| Product | response regulator receiver (CheY) and GAF modulated Serine phosphatase |
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| Protein accession | YP_321181 |
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| Protein GI | 75906885 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00161844 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0426655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA CTAAGGTAGA AAAACTGAAG CTCATGGTAG TAGACGATGA GCCAGATAAC
TTAGATTTAC TCTACCGTAC TTTTAGGCGA GACTTTCACG TATATAAAGC TAATCATGCC
CGGAAAGCTT TGGAAATTCT AGCTCAAGAA GGCGAAATGG CCGTAATTAT TTCAGATCAA
AGAATGCCTG AAATGAACGG TACCGAATTT CTCAGCCTGA CAGTAGAAAA ATTTCCCGAC
ACCATTCGGA TTTTACTTAC AGGTTTTACA GATGTGGAAG ATTTGGTAGA AGCCATTAAC
TCTGGTCAAG TTTTTAAATA CATCACCAAA CCTTGGAACC CTGAACGCCT GAAAAATTTA
GTTGAGCAAG CTACTGATAC ATATCGGTTG GTCAAAAAGC GCACCCACGA ATTGCGTCGG
TCTTTGCGGC GGGAATCTTT ATTTAACGCG GTCACCACAG CAATTCGAGA GTCATTAGAT
TATGAGAGTA TGCTGCAAAA AATTGCAGCT ACTATTGGAC AAACTTTTGA AGCTACTTGT
TGTTTACTCA AACCAGTAGA AAACAATCGC CTCACTGCAA ATCAATTTTA TTATCGAAAT
CCAGCATACA ACTTACCTGA TAGCGCCTTT GATCCCACTA CTTTAATTGC CCAAGTACTG
GAAACCGGCC ATTATCAAAT TGCCCAAGAT ATATACAATG ACAATCCCTG TAACTACTTG
GTTGTCCCTC TATCTTACCA ACAGCACTTA TTAGCTGTCT TGGCTCTTTA CCAGTGGGGA
CGAGAGCATC CTTGGCAAGA CGAAGATATT CAATTAATTA CGGGTGTGGC TGAACAAGCA
GCTTTAGCCG TTTCCCAAGC AAAACTCTAC CAACGCCTGC AAGAAAAACA ACAGCAAATT
AGTGCTGAGT TAGAAGTGGC GCGGCAAATT CAAAATAATC TACTACGCCA AACCCTACCG
GATATCAAAA GCGCAAAATT ACAAGCTTGC TGCTATCCTG CAAGAGAAGT AGGAGGCGAT
TTTTTTGAAA TCTTTGTTCA CCCCACCAAA GGTGATGTGT GGTTAGCAGT GGGCGATGTT
TCCGGTAAAG GCGTACCTGC TGCTTTATTT ATGGCTAGTG CAATTTCTGT ATTAAGACGA
GAATTAGCCC AAGAAATCCC AGCCGAACCC AATGTAGTTA TACATAATCT CAATCATGCT
TTGTGTGATG ACTTAATTAG TAACAATTGC TTTATTACTT TTGTGCTAGC TCGTTATACA
CCTACTACTA GAGAGTTAGT CTATGCAAAT GCTGGACACA TTTATCCCCT GGTTTGGTCA
AATCAAACCG CACCAGAAAA ACCTAACTAT CTTACAGTGA GAGGCATACC TTTAGGCATT
TTACCGAAAT GGCAGGCTAA GTCGGGTAGT TTGATTCTGG CACCCGGAGA TACACTGCTG
TTAGCCAGCG ATGGTATCAC GGAAGCAATG GTATCAAATA GTTTATTTGA AACAGTAAAA
ACCGTGGGTG GCGTTCAGCC AGCAACTCAT TCTATGCTGA ATCAAGATGG TCTGTGGCAA
CTCTTACAAA AAGAGCCTCA ACCATTGTCT CTCAACCATT TACTATCACG TATTCAGGCA
GATAATCACG TCCAAGAAGA CGATCAAACT ATACTCTCTC TGGAGGTTTT GTAA
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| Protein sequence | MTETKVEKLK LMVVDDEPDN LDLLYRTFRR DFHVYKANHA RKALEILAQE GEMAVIISDQ
RMPEMNGTEF LSLTVEKFPD TIRILLTGFT DVEDLVEAIN SGQVFKYITK PWNPERLKNL
VEQATDTYRL VKKRTHELRR SLRRESLFNA VTTAIRESLD YESMLQKIAA TIGQTFEATC
CLLKPVENNR LTANQFYYRN PAYNLPDSAF DPTTLIAQVL ETGHYQIAQD IYNDNPCNYL
VVPLSYQQHL LAVLALYQWG REHPWQDEDI QLITGVAEQA ALAVSQAKLY QRLQEKQQQI
SAELEVARQI QNNLLRQTLP DIKSAKLQAC CYPAREVGGD FFEIFVHPTK GDVWLAVGDV
SGKGVPAALF MASAISVLRR ELAQEIPAEP NVVIHNLNHA LCDDLISNNC FITFVLARYT
PTTRELVYAN AGHIYPLVWS NQTAPEKPNY LTVRGIPLGI LPKWQAKSGS LILAPGDTLL
LASDGITEAM VSNSLFETVK TVGGVQPATH SMLNQDGLWQ LLQKEPQPLS LNHLLSRIQA
DNHVQEDDQT ILSLEVL
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