Gene Tery_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0615 
Symbol 
ID4241986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp997127 
End bp998314 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content30% 
IMG OID638105919 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_720532 
Protein GI113474471 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00858549 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATCAA AAATACTTGT TGTAGATGAT GAACCAGATT TTGAATCACT GATCATCCGT 
AGCTTTAGAA AGAAAATAAA ACAAAAAGAG CTGGATTTTA TTTTTGCCAC AAATGGTATA
GAAGCACTAG AAATTTTGTC AGAGGGAGTT AATATAGATA TAGTATTAAC TGATATTAAT
ATGCCCTTAA TGGATGGGTT AACTTTATTA GATAATCTTC GAGTTTTCTA TCCTGATATT
AAGGCAGTAA TTGTTTCTGC TTATGATGAT CTCGATAAAA TTAGGTCTGC GATGAATAGA
GGTGCTTTTG ATTTTTTGAC TAAGCCTATA GATTTTCAAG ATTTAGAAAT TACAATCCAA
AAAACATTAG AAAATGTTCA ACAGCTCAAA GAAAATAAGC GTTTAAAGCA AGAAAAACAT
GAGGCAGAAG CAGCTAATCG AGCAAAAAGT GTATTTCTCG CAAATATGAG CCATGAATTA
CGAACACCAT TAAATGCTAT TATTGGGTAC AGTGAAATTT TACTAGAAGA TGCTCATAGT
TTAGGTTCTA AAGACTTTAT TCACGATATT AACAATATTC ATACTTCAGG AAAACATTTA
TTAACGATAA TTAATGATAT TCTCGATCTT TCAAAAATTG AGGCTGGTAA GATGGATGTT
CACTGGGAAA GTGTTAATAT TATGGTATTA ATTGAAAATG TTTTAGCAAC TATTCAACCT
TTGATTGAAC AAAATAATAA TATATTAGAA ATAATTTGTG AAGATAACCA AGAACCGATA
ATGGCAGATC CTAATAAAAT GCGTCAGGTA ATTTTAAATC TTTTGAGTAA TGCAGCTAAA
TTTACAGAAA ATGGCAAAAT AATTTTGAAA GTTAAAGTTG CTAATAATGA TGAAGATTTT
ATTTCTCAAA ATAGAGACTG TAATTTTACA GATAAGGTGT TAATTCTAAG TGTTGCTGAT
ACTGGTATAG GTATATCAGA AGAAAAAATA GATAGTTTAT TTCAACCATT TACTCAAGCT
GATAATTCAA CAACACGAAA ATATGGAGGA ACAGGTTTAG GTTTAGCTAT TAGTCGTCAC
TTCTGTAAAA TGATGGGTGG GGATATTACT GTAGTTAGTG AAGTCAATAA GGGTTCAATA
TTTACTGTGA AATTTCCTGT TCCTCAAATA ATATCTATTG ATTCATAA
 
Protein sequence
MSSKILVVDD EPDFESLIIR SFRKKIKQKE LDFIFATNGI EALEILSEGV NIDIVLTDIN 
MPLMDGLTLL DNLRVFYPDI KAVIVSAYDD LDKIRSAMNR GAFDFLTKPI DFQDLEITIQ
KTLENVQQLK ENKRLKQEKH EAEAANRAKS VFLANMSHEL RTPLNAIIGY SEILLEDAHS
LGSKDFIHDI NNIHTSGKHL LTIINDILDL SKIEAGKMDV HWESVNIMVL IENVLATIQP
LIEQNNNILE IICEDNQEPI MADPNKMRQV ILNLLSNAAK FTENGKIILK VKVANNDEDF
ISQNRDCNFT DKVLILSVAD TGIGISEEKI DSLFQPFTQA DNSTTRKYGG TGLGLAISRH
FCKMMGGDIT VVSEVNKGSI FTVKFPVPQI ISIDS