| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1423 |
|---|
| Symbol | |
|---|
| ID | 3682659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1754876 |
|---|
| End bp | 1755823 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716760 |
|---|
| Product | response regulator receiver (CheY) and GAF domain-containing protein |
|---|
| Protein accession | YP_321941 |
|---|
| Protein GI | 75907645 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATG CTGTTACCGA AATTCAGACT GGTCGCCGTC AATCCGCAAC ATTGGAACGA
ACAAAAAAAC TGAAGATTTT AGTGGTTGAC GATGAGCCAG ATAATTTAGA CTTGCTTTAT
CGCACTTTTC GCCGAGATTT TAATGTCCTC AAAGCTGATA GCGGAGTAAA TGCCTTAGAA
GTATTGGCCG CAGAAGGAGA AGTAGCCGTA ATTATCTCCG ATCAGCGAAT GCCAGAAATG
AAAGGAACTG AGTTTTTGAG TAAAACTGTG CCTCAGTTCC CCGATACAGT GAGAATAATT
CTGACTGGTT TTACGGATAT TGAAGACTTG GTAGAGGCGA TTAATGCTGG GCAAGTCTAC
AAGTATATTA CTAAGCCCTG GGACCCTGGC GAACTGAAAG CAGTTGTCCA GAGGGCAGCA
GAAACCTATG ATTTGCTCAA GCAAAGGACA GAAGAATTAC GCCGTGCTAA TGCCCAAATG
TCACTGTTAA CAGTTTTGGT GCAGGTGACA CAAGCCTCAA ACAGTTTAGA AACAATTCTG
ACACCCATTG CCACTGCATT TGCTGAAAGT TTCGCCGTCA ATGCTTGTAT TTTACAAATG
TTAGAAGGGC AAACCTTAAG CACAATACAA GGCTTTTACA GTCAACAAGG TACTGTCAAC
AACTGGCTAA ACCAAGACCC CCTGACAAAC GAGGCGATCG CTACTGGTCA AATTCAGGTA
GCTGCCAATA TTGCCAAAGA CCCCAAATTA GCCAGCATCA GTCAATATCA AGATAACGGT
ATCCAAGCTC ATGTAGTCAT CCCCATTACC TACCGCAATG AGATGTTAGG TGTGCTGTCC
CTCCAGTGGC AACAACCAAT CTCTTTACGG GAAGATGAAT TAACACTCAT CCATTTATCA
GCCCAACTGG TAGCGATCGC TCTGACTAGT AGTCGCTGTA GTCTATAG
|
|---|
| Protein sequence | MADAVTEIQT GRRQSATLER TKKLKILVVD DEPDNLDLLY RTFRRDFNVL KADSGVNALE
VLAAEGEVAV IISDQRMPEM KGTEFLSKTV PQFPDTVRII LTGFTDIEDL VEAINAGQVY
KYITKPWDPG ELKAVVQRAA ETYDLLKQRT EELRRANAQM SLLTVLVQVT QASNSLETIL
TPIATAFAES FAVNACILQM LEGQTLSTIQ GFYSQQGTVN NWLNQDPLTN EAIATGQIQV
AANIAKDPKL ASISQYQDNG IQAHVVIPIT YRNEMLGVLS LQWQQPISLR EDELTLIHLS
AQLVAIALTS SRCSL
|
|---|
| |