| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0605 |
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| Symbol | |
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| ID | 5136573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 643350 |
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| End bp | 644960 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532063 |
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| Product | response regulator |
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| Protein accession | YP_001216555 |
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| Protein GI | 147674873 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCA ACCGTGAAAT TCTGCTAGTG GATGATGAAC CTGCGGTGTT GAATGCCTTA
AAGCGCGAGC TGCGTCCTTA TTTCCCCCAT CTACATACCG CCACTTGTGC GCAAGAAGCG
TTAGAGCTTT TAAAGCAACA TCCAGTACAG ATGGTGATTT CCGATTATCG GATGCCGGGC
ATGAATGGTG CGGATTTGGT GATAGAGATT AATCGCCGCT ATCCGCACAT TATGTCGCTT
ATCCTCTCTG GGCAGGCGGA TATGAATGGA TTATCGCGAG CCTTGAATGA AGGCGATCTG
TACAAATTTT TGCTCAAGCC TTGGGAGCGA AATTATCTGC TGCAAACAAT CTTGCAGTGT
TTTAGTGAAA AAGAGCGCCG TGAAGAGTTT GATACCGTTT CCGGACTCAA AACATGGCAA
GTACTCAACA AACAGATCTC ATTATTACAG TCACTGGCTG ACCACCCCTA TCTTGTGCTG
ATCATGGAGT GGACGGCGCC GCTGGAGGAC CTGCAAAAAC AAGCCATTTC GCAACATGTG
ATCCAGCAAC TTCCAGAAAC TGAGCACATC TATCAAGATG GAGCACGTTG GTTTTGGGTT
ACTCACCGCT TAACGCCTTG GTATCAAACA TTATTTAAGT TAATTGATAG CTTTCAGAAC
CCAGCACCTT CAGATAATGC GGCCTTTGAT ATTGCTCAGC CGCCGCATTG GTGGATTGCC
GATATTGAGT CTTGGCCTGA TGTTGAGTTG AAGTTAGTCA ATCCGCCATG TGAGAAAAGC
GCGTTGGTTG ATCATTTCCC TATCTTTGGG TTGGGCAATG TGGACGAGAC GCTGGAAATT
AAACAGCTAT TGAATATTTA TCGTGACCTC CAACTCGGCC ATTTTTGTGC CTTCTATCAG
CCTCAAAAGC ACATCGATTC TGGGGGCGTC GTAGCGTTTG AAGCCTTAGC CAGACGAGTG
ATTGGCAAAG GATTGTATGA AATGCCCGAT CGTTTTTTCC CGATCTTGGA AAAGTACCAT
TTGATCCCGA CGTTAACTGA AGTCATGGTG CGCGACATTT TGACCTTTTT AATGACGGAA
GATGCGGTCT TACAAGACAT CACCATAGGG GTAAATATTC CGGGAAAAAT GCTCACTGAC
GGCAGTTTTT ATCGTTTGTT ACTGAGCGTC GCGGAGGAGA AGCAAGCACA ACATGCGTTG
CATCGACTCT CTGTTGAGAT CACGGAACAC GATTTGATTG CGGATTTTGA TGCCGCTAAA
CATGAGATTT ATAAGCTAAA ATCATTAGGA ATACGCTGCG CGTTAGATGA TTTTGGTACG
GGATATTCTG GTTATGAGTA CTTGTGTGAA ATTCCGTTTG ATGTAGTGAA AATTGATGGG
CGATACATTC AAAGTTTGGG CAAGGCGGAA TCAAGTACGG TCATTTTACA ATCGATGATT
TCTAGCATTA AATCCTTGTC TATGCAGGTG ATTGCAGAAT GGGTCGACTC AGATCAGCAA
TATCAAATTT TACAAGAGAT GGGATGTGAC CTGGTGCAAG GTTATTTAGT TAGCCCGGCT
ATTTCACCAC AACAAGTCCT GAACTATCTC CATAACAAAC TATCTCCATA A
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| Protein sequence | MQSNREILLV DDEPAVLNAL KRELRPYFPH LHTATCAQEA LELLKQHPVQ MVISDYRMPG
MNGADLVIEI NRRYPHIMSL ILSGQADMNG LSRALNEGDL YKFLLKPWER NYLLQTILQC
FSEKERREEF DTVSGLKTWQ VLNKQISLLQ SLADHPYLVL IMEWTAPLED LQKQAISQHV
IQQLPETEHI YQDGARWFWV THRLTPWYQT LFKLIDSFQN PAPSDNAAFD IAQPPHWWIA
DIESWPDVEL KLVNPPCEKS ALVDHFPIFG LGNVDETLEI KQLLNIYRDL QLGHFCAFYQ
PQKHIDSGGV VAFEALARRV IGKGLYEMPD RFFPILEKYH LIPTLTEVMV RDILTFLMTE
DAVLQDITIG VNIPGKMLTD GSFYRLLLSV AEEKQAQHAL HRLSVEITEH DLIADFDAAK
HEIYKLKSLG IRCALDDFGT GYSGYEYLCE IPFDVVKIDG RYIQSLGKAE SSTVILQSMI
SSIKSLSMQV IAEWVDSDQQ YQILQEMGCD LVQGYLVSPA ISPQQVLNYL HNKLSP
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