Gene Pnap_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3729 
Symbol 
ID4686231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3971077 
End bp3972048 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID639836747 
Productresponse regulator receiver protein 
Protein accessionYP_983946 
Protein GI121606617 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.800159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0418103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGG ACAAAATTCT TTTCGTCGAT GACGAACCCA TGGCACTCAA ATATTTTGAA 
CGCCTGGTCA CTCCCCTGGC GCCCGTGATC ACCGCCATCT CGGTCGAGCA GGGCAAGGCC
ATCCTGCGCG AGCGCGGCGA CGAAATCGCG GTGCTGGTGT CCGACCAGCG GATGCCGGGC
GCGCGCGGCA ACGAACTGCT GGGCTATGCG CGCGAATTCC ACCCGGGCAT CGTGCGCATG
CTGACCACCG CCTACTCCGA ACTTGGCGAG GCCATCGAGG CCATCAACAG CGGTGAAATT
TACCGCTACA TCACCAAGCC CTGGGACCTG GGCAGCCTGC ACGCCGACCT GCGCAATGCG
CTCGAACTGG CCAAGCTGCG CAGCGAGCGC GACCATCTTG CGCGCGAAAA GCTGCTGGTG
CAGCAGCAGC AGCTTCTGGG CAGCCGCCTG GCCGGCCTCA CGATGCTGGC GGGCACGGTA
CGCGGCGACA GCAGCGCGGC CCTGCACCGC TACGCGCGTA CCGCCGTCGC GGCAGGCTGC
AGGGTGCCCG CCACGCCCTG GCACAAATGG GACCATGCCG GCCTGCTGCA AGCCGAAGCG
CGGCGCGGCA TTGCCATTGC CCGGGATCTG GAACGCTGGC AGGCTGAATT CGGCGATGAC
CGCACACCCG AGCGCGCCTT TTCGCAACTG GCGCAGGCGC TGGGCGCGCA GGCCCGGGGC
GCGAGCGTTC ACCTGCCGTC GGCCGCGGCC CTGACGGCCC TGCTCGACGC CGCGCCGGGC
CAGCTGCCCC AAGCCGCCGA GACCGCCTGG CTGGCCTGGC TCTTGTGGTG GAGCGCGCCT
GTTCAGGTGC AGCCGACCGC AGGAAACAAG GCCGGCGGCT GGACGCTACA AGCCCCGGCC
GGCGGTGCCG CCGAGCCCGC GCCACCTGCC GACTGGCTGG AGCGGATGAT CGAGGACCTG
GCGGAAATCT AG
 
Protein sequence
MSPDKILFVD DEPMALKYFE RLVTPLAPVI TAISVEQGKA ILRERGDEIA VLVSDQRMPG 
ARGNELLGYA REFHPGIVRM LTTAYSELGE AIEAINSGEI YRYITKPWDL GSLHADLRNA
LELAKLRSER DHLAREKLLV QQQQLLGSRL AGLTMLAGTV RGDSSAALHR YARTAVAAGC
RVPATPWHKW DHAGLLQAEA RRGIAIARDL ERWQAEFGDD RTPERAFSQL AQALGAQARG
ASVHLPSAAA LTALLDAAPG QLPQAAETAW LAWLLWWSAP VQVQPTAGNK AGGWTLQAPA
GGAAEPAPPA DWLERMIEDL AEI