| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06089 |
|---|
| Symbol | |
|---|
| ID | 5556966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 1252155 |
|---|
| End bp | 1254200 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640910563 |
|---|
| Product | transmembrane sensor histidine kinase |
|---|
| Protein accession | YP_001448209 |
|---|
| Protein GI | 156977303 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGA TTCGCAAAGT ATATCAGTAC GCAGAACCCA ACCTTAGCCT CGTAGGATGG
ATGGGCTTCA TAGGCTTTCC TATTTACTAC ATCGTTTGGG AGTTCATGTT CCCGCAGCCA
TACGAAAACC TACCGCTTCG TATTCTTTGC TCAGTCTTAT TCTTCGGCAT CATTTATCGT
AATCGTACGC CATTTGAGTG GCGTGGATTT TTACCCGCCT ATTATCAAGT GGTCACAACG
CTCTGCTTAC CTTGCTTCTT CTTTTACATG TTGCTGATGA ACAATTGGTC GAATGTTTGG
GTGATGTCGT TTATGTCGGC GATTTTTTTG CACATACTGC TCGTGCATAT CACATCGGTG
ATGTTTGTTC AGACATTTGT GGGAATTGGT CTTGCGACGT TTTTTGCTTG GGTAGCACAG
GGGTTTCACC TCGAACTCAC CATGGATTGG ACGCACGTAC CGATCTTCTT GTTTATTTAT
CTCTTTGGTA ACTTGTTCTA CTTCCGAAAC CAGGTAGAAC ATGAAGCAAA AGTCTCAATC
GCAAAGTCTT TTGGGGCGGG TATCGCCCAT GAAATGCGAA ACCCACTCAG CGGTTTATTA
ACTTCTATCG ATGTCATTCA ATCCGTGTTG CCAAATCCGA AAGAGGGCAA GAAAGAGCAG
TACACGTTAA GTGATGAAGA TGTGACACTG TTACGAGAAG TCAGCAGTGA CGCAATGAAG
ATCATTCATT CCGGAAACGA AACCATTGAT TTGCTTCTTA CTTCAATTGA TGAGAACCGT
GTTTCTCGCT CGACATTTAA AAAACACTCT GCACAATCTG TCGTTGAGAG TGCGATTGAA
AGTTTCAGTT ACAAACGATC GACAGACCGT TTTGCTATCT CCTTGGATGT AAGAAGTGAG
TTCGATTTCT TGGGCAGCGA TACATTGCTT AAGTATGTGA TGTACAACTT GTTCAAGAAC
GCCTTCCACC ACCGTAGTTC AGAAGACTTC CACATACACG TCACCATGTA CAGTGATGAA
TTTGCCAACC AAATTGTGGT GACTGATAAC GGTTCGGGCA TTGCGCCAGA AGTTCTTCAA
AGTATTTTCC AAGATTTCTA CACTACGGGT AAGTCAGGAA ACTACGGCCT TGGACTGCCT
TTCTGTAAGA AAGTGATGCG TTCATTTGGC GGTGATATTC GTTGCCAATC AGAAGTCGGC
GAGTGGTCTC AGTTCACGAT GACTTTCCCT ACGATTGGCT CAAGCGCAGT CAAAGAGATT
AAGAGTGAGC TAACCAAGCT AAAAACGATT TTGTTTGTGA GTGAGCAAAA CATCTTAGTT
TCGAAAGTGA CGGACATTGC TCGTTTTATG AGATTCGAAC TCACGGTTCT CGATGTTCCT
GCGGTTCTTA AAAATAAAGA ATACGAGTTC GAGTTTGATT TGATCCTGAT CGACATGGAG
AGTTTAGACG CCAGTGGCAG CCATATAGAT AAGGTTGAGT CGTTACTGTC GTTCACTGAA
GCTCGCATTG TTTACATGTT TGAGCACCAT CCAATTCAAA GAGCGAGAAG CGTTTCTTTT
GAACCTATTT GGGTAGAGAC ACAAGCCTGG CTTCTGAATA CTCGAGCGAC CATCGACCGT
TTACTGTATG ACGCTAATTA TGTTGTTCCA TCGATGCCAG CGAAACCGCT CGATTCAACA
AACAAGCGAA CCATTATGGT GGTTGACGAT AATGAGTCTT TACGCAAGTT TACGGCCATG
CTGCTTGAGA AGCAGGGTTT TGAAGTGATC CAAACTGAGG ATGGGCTGCA GGCAATCAAC
GCATTGAATG AGAACAATGT TGACTTAATC CTAATGGACA TCGAAATGCC GGTGATGGAT
GGTGTAGAAG CATCTCGTCA AATCAGAGGT TCAAATAAGG CCTACGCTTC GGTACCTATT
ATTGCGCATA CTGGTGATAG CTCACCGATA ACACTGGACA AGATTGGTTC ATCTGGCATG
TCGGATTTCA TCGTTAAACC TGCGGATAAG AACAGGTTGT TCGACAAGAT TGCGAACTGG
ATTTAG
|
|---|
| Protein sequence | MDAIRKVYQY AEPNLSLVGW MGFIGFPIYY IVWEFMFPQP YENLPLRILC SVLFFGIIYR
NRTPFEWRGF LPAYYQVVTT LCLPCFFFYM LLMNNWSNVW VMSFMSAIFL HILLVHITSV
MFVQTFVGIG LATFFAWVAQ GFHLELTMDW THVPIFLFIY LFGNLFYFRN QVEHEAKVSI
AKSFGAGIAH EMRNPLSGLL TSIDVIQSVL PNPKEGKKEQ YTLSDEDVTL LREVSSDAMK
IIHSGNETID LLLTSIDENR VSRSTFKKHS AQSVVESAIE SFSYKRSTDR FAISLDVRSE
FDFLGSDTLL KYVMYNLFKN AFHHRSSEDF HIHVTMYSDE FANQIVVTDN GSGIAPEVLQ
SIFQDFYTTG KSGNYGLGLP FCKKVMRSFG GDIRCQSEVG EWSQFTMTFP TIGSSAVKEI
KSELTKLKTI LFVSEQNILV SKVTDIARFM RFELTVLDVP AVLKNKEYEF EFDLILIDME
SLDASGSHID KVESLLSFTE ARIVYMFEHH PIQRARSVSF EPIWVETQAW LLNTRATIDR
LLYDANYVVP SMPAKPLDST NKRTIMVVDD NESLRKFTAM LLEKQGFEVI QTEDGLQAIN
ALNENNVDLI LMDIEMPVMD GVEASRQIRG SNKAYASVPI IAHTGDSSPI TLDKIGSSGM
SDFIVKPADK NRLFDKIANW I
|
|---|
| |