| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2687 |
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| Symbol | |
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| ID | 8358847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3281034 |
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| End bp | 3284075 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964869 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_003122370 |
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| Protein GI | 256421717 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.70216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAG GAATAATGGA TTCAAAAAGA CGTGATTTAA ACCAGGGCAT GGCCGAGAGA
ATTCTTTCTT TGGACTGGTC AAAGACCCCT GTAGGTGAAA GATCCTCCTG GCCGCAAAGT
CTTATATCCA CGATTAAGAT GTTGCTTGGT TCGAGATATC CGATGATATT ATTATGGGGA
GAAGAGCTTA TTCAAATATA TAATGATGCT TACACCGCGT TGATCGGCGA TAAGCATCCC
TATGCCCTGG GCAAGTCAAT CAAGGAAACC CAAGCTGAAT CATGGGCCGT CATAGGACCG
ATGATCACAG AAGTGATGAC TACCGGCATA TCCAACTGGG TACCTGAGCA ATTACTTGCT
GTAAATCGTA CTGGGTTTAA TGAAGAAACA TATTTCAGTC TTTCCTATAG CGCTGTTGAA
AATGATGAGA ATAAGATTTC GGGGATGCTT TGTGTGTGCA GTGAAATCAC CCATCAGGTT
GTAGCAGAAA GACGGTTACG CATACAACGT GATCTTTCTG CTGCAGCCAG TAACGCCAAT
AGTATTGAAC AGGTGTTTGA GGATATTATG GCAGTAGCTG GTAATTATAC AACAGATCTC
CCATTCACGA TCCTATATAT GCTGGAAAAT GAGCAATGGG TTTGTCGTGG GATGACGGGC
GTGCCTGCCG ATGAATATGC ATCTGCCCCA TGGCAGATGG AGAAGGCTAT GCATGGGCAA
ACCATCATAA CTGATAATGT AGCGCAATTC ATGACAGTAC GGGGAGGATT ATGGAACGAA
CTGGTACAAA AATCAGTAAC AATACCCATT CCTTCCGCGA TACCATCCAG GCCACTTGGG
ATGCTGGTCG CAGGAGTTAA CCCTAATGCG GTACTGGATG AAAACTACTT ATCGTTTTAT
GCACTGCTGT CCGGACAAAT ATCTGTAGCT GTCAGAAATG CATTTGCTTA TGATGAAGAG
CGTAAGCGCA CAGCTTATCT GGCGGAAATT GACAGGGCTA AAACTGCTTT TTTCAATAAT
ATCAGTCATG AATTCAGGAC GCCCCTTACG TTGATCCTGG GACCGCTCCA CGACATCCTT
ATCCATCAGG CCAATTCAAG TAGCAAGCAC ACCATTGATC AAGTCAGTAT TGCTTACAGC
AATGCGGTCA GGTTGCTAAA GCTGGTAAAT ACATTACTGG ATTTCTCACG TATAGAGGCT
CATAGAATGC AGGCCAGTTA TACTCCTGTC GATTTATCAC AGTTTACAAC TGAGCTAGCC
AGTTCTTTTG AATCGGCTAT TAAAAAAGAA AATCTCTTCT TTCACATCGA TTGTACCCAA
CTAAGCGACG TTATCTATGT GGATACACAG ATGTGGGAGA AAATTGTCTT TAACATTTTA
TCCAATGCGC TTAAATTCAC TTTTACAGGT GGCATTTCTG TCTCCTTGCA GGAAACAGCT
GAAAATGCGG TGCTTATAAT TTCAGATACT GGTGTGGGGA TACCTGCAGA AGAGTTGCCC
CATATATTTG ACAGATTTCA TCGTGTCACC TCATCGCGTT CACGTACGCA TGAGGGTACA
GGAATCGGGC TCGCACTTAC CAAAGAATTG GTGACCATCC ATGGAGGAGA CATTACGGCT
GTCAGTCAAC CGGACGTTGG CACAACATTT ACCATACGTA TACCAAAAGG TACTGCTCAC
CTGGATGCTA AGTCAATCAG GGAATTCATT GATAAAGAGG GAACTGATTT CTTACAGGAA
AGTTATACTA ATGAAATTTC TTCCTGGCAA AGGATGGATG ACAAAGCAAT TACTACTACC
GATGCGGATG GAGATCTTAT CCTTGTAGTG GATGACAATT CACAGATGGC CAACTATATT
CAAAAAATGC TCTCAAGGCA CTGGAAAGTA ATAACTGCCA GCAACGGGCG TGAAGCACTA
TCATTGATCT ATCAGGAGGC TCCTGCACTT GTAGTCTCTG ATGTGATGAT GCCTGACATG
AATGGTTTTG AACTGCTGAA TGCCATAAAA AGCGATGTTG AAATCAGCAA CATTCCAGTG
ATTCTGCTGT CTGCCCGGGC AGGAAAAGAA GCCACCATAG AGGGGCTTGA GAAAGGAGCA
AATGACTACA TCATTAAACC ATTCTATGCG GACGAACTGA TTGCCAGGGT ATCCACACAG
CTACAGCTCA GGAAAGCGGA ACTTGCAAAT ACGCATCTCA GGGAGCGTGC AGAAAGTCAA
CGCCTGTTTC AGAAAGAACT GGAGCGCATG GTAAGGGATC GTACTGCTGA CCTGACAAAG
ATCAATGCCG AACTTGAGCA ATTTGCTTTC GCTGCAAGTC ACGATCTGCA AGAACCGCTT
CGCAAGATAT TGCTCTATTC GCAGATGCTC GCAAATGAAA TTTCTTCAGA TCAACAGAAA
GCTGGCAGAT ATCTGGAGAA AATAATGACT TCATCTGCGC GGATGCGTAA CCTGATTAAT
GACCTCCTGA ATTTTTCACG CCTCAGTATA AAGGAGGTAG CATTCACATC AACTGATCTC
AATACAATTC TAGAGAACTT ACTAGTTGAT CTGGAGCTAC AAATCAACAG GTCACAGGCA
AAAATTACAT ATACCGATCT ACCGGTCATA GAGGCAGTAC CACTACAAAT GCAGCAGCTT
TTCTTCAATT TGCTTTCGAA TGCACTTAAA TTCAGCGATA CCAGAAGAAC TCCGGCTATT
ACCGTGCAAG CCAGTATAGC AACATCAGCG GATGTAGCTT TACTTAGTGT ACCTGACCCG
TCAGCGGAAT ATGTCAAAAT TGTCATAACA GACAATGGCA TCGGCTTCGA TCAGAAATAT
GCTGATCAGA TCTTTACCAT GTTTCAAAAA CTACATCACC GCACAGCTTA TGCGGGGACC
GGTATAGGAC TGGCATTATG CAAAAAAGTG GTAATTAACC ATCATGGTAT TATTCATGCA
ATGTCTGTTG AGGGTGAGGG CAGTAAGTTT ACGATTATAC TTCCGTCGCG GCAATCAACC
CCAAATGGGG GTACCGGTGT TAGTGACGGG GCAGACTTAT AA
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| Protein sequence | MDRGIMDSKR RDLNQGMAER ILSLDWSKTP VGERSSWPQS LISTIKMLLG SRYPMILLWG
EELIQIYNDA YTALIGDKHP YALGKSIKET QAESWAVIGP MITEVMTTGI SNWVPEQLLA
VNRTGFNEET YFSLSYSAVE NDENKISGML CVCSEITHQV VAERRLRIQR DLSAAASNAN
SIEQVFEDIM AVAGNYTTDL PFTILYMLEN EQWVCRGMTG VPADEYASAP WQMEKAMHGQ
TIITDNVAQF MTVRGGLWNE LVQKSVTIPI PSAIPSRPLG MLVAGVNPNA VLDENYLSFY
ALLSGQISVA VRNAFAYDEE RKRTAYLAEI DRAKTAFFNN ISHEFRTPLT LILGPLHDIL
IHQANSSSKH TIDQVSIAYS NAVRLLKLVN TLLDFSRIEA HRMQASYTPV DLSQFTTELA
SSFESAIKKE NLFFHIDCTQ LSDVIYVDTQ MWEKIVFNIL SNALKFTFTG GISVSLQETA
ENAVLIISDT GVGIPAEELP HIFDRFHRVT SSRSRTHEGT GIGLALTKEL VTIHGGDITA
VSQPDVGTTF TIRIPKGTAH LDAKSIREFI DKEGTDFLQE SYTNEISSWQ RMDDKAITTT
DADGDLILVV DDNSQMANYI QKMLSRHWKV ITASNGREAL SLIYQEAPAL VVSDVMMPDM
NGFELLNAIK SDVEISNIPV ILLSARAGKE ATIEGLEKGA NDYIIKPFYA DELIARVSTQ
LQLRKAELAN THLRERAESQ RLFQKELERM VRDRTADLTK INAELEQFAF AASHDLQEPL
RKILLYSQML ANEISSDQQK AGRYLEKIMT SSARMRNLIN DLLNFSRLSI KEVAFTSTDL
NTILENLLVD LELQINRSQA KITYTDLPVI EAVPLQMQQL FFNLLSNALK FSDTRRTPAI
TVQASIATSA DVALLSVPDP SAEYVKIVIT DNGIGFDQKY ADQIFTMFQK LHHRTAYAGT
GIGLALCKKV VINHHGIIHA MSVEGEGSKF TIILPSRQST PNGGTGVSDG ADL
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