| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0455 |
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| Symbol | luxN |
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| ID | 5134680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 507415 |
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| End bp | 509475 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640530778 |
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| Product | sensor histidine kinase/response regulator LuxN |
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| Protein accession | YP_001215296 |
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| Protein GI | 147672372 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAGTGA GCATGGATGT AATAAAGAGA GTGTATCAAT ACGCAGAACC TAATCTGTCC
TTAGTCGGAT GGATGGGCAT GCTTGGCTTT CCTGCCTACT ACTTCATCTG GGAATATTGG
TTTCCGCAAC CATACGAAAA TTTAGGGCTG CGCTGTGCGG CAGCGGTGCT GTTTGGTGGG
CTGGTGTTTC GTGATTCGAT GCCTAAGAAA TGGCAGCGGT ATATGCCGGG CTATTTTCTA
TTCACCATAG GCTTCTGCTT ACCCTTTTTC TTCGCTTTTA TGATGTTAAT GAATGACTGG
TCGACAATTT GGGCCATGTC GTTTATGGCG TCCATTTTTC TGCATATTCT CTTAGTGCAC
GATACGAGAG TAATGGCGTT ACAAGCACTT TTCTCCGTGT TGGTGGCCTA TCTTGCGGTA
TATGGTTTGA CGGATTTTCA CCCGACCACT TTGATTGAAT GGCAATACAT ACCGATCTTT
TTGTTTACTT ATGTATTTGG GAATTTATGT TTTTTCCGTA ACCAAATCTC TCATGAGACC
AAAGTGTCGA TTGCCAAAAC GTTCGGAGCG GGGATTGCCC ATGAAATGCG TAATCCACTC
AGCGCTTTGA AAACGTCGAT TGATGTTGTG CGAACCATGA TCCCTAAACC GCAAACTGCA
GCTCATACGG ATTATTCCTT GGATGCGCAA GAGCTGGATC TGCTGCATCA AATTTTGAAT
GAAGCTGATG ATGTCATCTA CTCTGGCAAT AACGCGATTG ATTTGCTGCT CACCTCGATT
GATGAAAACC GCGTCTCTCC GGCGAGTTTT AAAAAACACA CCGTAGTGGA TGTGATTGAA
AAAGCGGTGA AAACTTTTCC GTATAAAAAT GCAGCGGACC AGCACTCGGT AGAGCTTGAA
GTGCATCAGC CGTTTGACTT TTTTGGCAGT GATACTCTAC TGACTTATGC GCTATTTAAC
CTGTTGAAAA ATGCCTTCTA TTATCAAAAA GAGCATTTCT CGGTTCGTAT TTCCATTGAA
CAAACCCGTG AGCAGAACCT TATTCGAGTC CGTGATAACG GCGTGGGGAT TGCGCCAGAG
ATGTTGGAAG ACATTTTCCG TGATTTCTAT ACCTTCGGTA AAAATGGCAG CTATGGGCTA
GGATTGCCAT TTTGCCGCAA AGTGATGTCC GCATTTGGGG GGACGATTCG CTGTGCGTCT
CAACAAGGTC AATGGACAGA ATTCGTATTG AGCTTTCCTC GTTACGATTC CGATACGGTT
AACGAGATAA AAACAGAACT GCTGAAAACC AAATCGCTCA TTTATATCGG CTCAAATCAA
GCTATCGTTC GAGAGTTAAA TCAGCTCGCA GTAGAAGATG AGTTTGGTTT TACCGCTATT
TCTGCGCAGC AAGCAGTAAG ACGCCAAGAT TATGAGTTTG AGTTCGACCT TATTTTGCTC
GACCTTGATG ACGCTACGGC GCAGGGAGAA CTACTGCCGA AACTTGAAGG GACATTGAGT
TTTGCAGAAG GCTGTATCGG CTATGTGTAT GATCCGGGCA AAACGTACGC AGTAAACATT
AACCGCTATC TGCGCATCCA ACCGATCAGT ATTCATTCTA TTCTCAGAAA GCCGCGGAAA
ATCATCGAAC GCTTGTTGTT TGAGCAAGAA TCCTTATCGA TGAATCGTAA CGTGATCCCC
TTGCAAAAGA GTCGGCATGA ACGACGTATT TTGGTGGTTG ATGATAATCA ATCGATCCGA
ACTTTTACGG CTATTTTGCT TGAGCAACAA GGTTATGAAG TGGTGCAAGC CAACGATGGT
AGTGAAGTGC TCAAGCATAT GGAGAGTCAA AACATCGATT TAGTGTTGAT GGACATTGAA
ATGCCGAATG TCGGGGGATT AGAAGCGACG CGTTTAATTC GCGACTCTGA GCATGAATAT
AAAAATATTC CGATCATTGG TTACACCGGT GATAACAGCC CCAAAACCTT GGCTCTGGTA
CAAACCTCCG GCATGAATGA TTTCATTGTG AAGCCTGCTG ACCGTGATGT ATTGCTAAAT
AAAGTGGCAG CTTGGGTGTA G
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| Protein sequence | MIVSMDVIKR VYQYAEPNLS LVGWMGMLGF PAYYFIWEYW FPQPYENLGL RCAAAVLFGG
LVFRDSMPKK WQRYMPGYFL FTIGFCLPFF FAFMMLMNDW STIWAMSFMA SIFLHILLVH
DTRVMALQAL FSVLVAYLAV YGLTDFHPTT LIEWQYIPIF LFTYVFGNLC FFRNQISHET
KVSIAKTFGA GIAHEMRNPL SALKTSIDVV RTMIPKPQTA AHTDYSLDAQ ELDLLHQILN
EADDVIYSGN NAIDLLLTSI DENRVSPASF KKHTVVDVIE KAVKTFPYKN AADQHSVELE
VHQPFDFFGS DTLLTYALFN LLKNAFYYQK EHFSVRISIE QTREQNLIRV RDNGVGIAPE
MLEDIFRDFY TFGKNGSYGL GLPFCRKVMS AFGGTIRCAS QQGQWTEFVL SFPRYDSDTV
NEIKTELLKT KSLIYIGSNQ AIVRELNQLA VEDEFGFTAI SAQQAVRRQD YEFEFDLILL
DLDDATAQGE LLPKLEGTLS FAEGCIGYVY DPGKTYAVNI NRYLRIQPIS IHSILRKPRK
IIERLLFEQE SLSMNRNVIP LQKSRHERRI LVVDDNQSIR TFTAILLEQQ GYEVVQANDG
SEVLKHMESQ NIDLVLMDIE MPNVGGLEAT RLIRDSEHEY KNIPIIGYTG DNSPKTLALV
QTSGMNDFIV KPADRDVLLN KVAAWV
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