Gene Cpin_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1404 
Symbol 
ID8357524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1675041 
End bp1675505 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID644963563 
Productresponse regulator receiver protein 
Protein accessionYP_003121102 
Protein GI256420449 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAC AACACATCCA TATCCTGTAT ATTGATGACG AGGTACATAA TTTAAATGCT 
TTTAAGGCAT CTTTCCGTAG ACTTTATACA GTATTTACGG CTACTTCGGC TGAAGAAGCG
GAGGAGATAC TTGCCAGAGA AGACATACAG ATCATCATTT CAGATCAGCG GATGCCTAAA
ATTACAGGAA TTGAATTTTT TGAATCAATC CTGGGCAAAT ATCCGGAGCC AATCCGGATG
TTGCTGACAG GCTACGCTGA CATCAACGCC GTTATCGACG CCATTAACAA GGGGCAGGTG
TATAAATATT TCTCCAAACC CTGGAATGAC GATGAATTAC GGCAGAACAT AGATAAGGCA
TATGAAGTAT ATGCCCTCAG AAAAGAGAAT AAGGAGTTGA CAGCAAAATT GCTGGATGTG
AATGAGAAGC TTGAATTTCT GCTCCGGCAG AAGCTGATTT CTTAA
 
Protein sequence
MSAQHIHILY IDDEVHNLNA FKASFRRLYT VFTATSAEEA EEILAREDIQ IIISDQRMPK 
ITGIEFFESI LGKYPEPIRM LLTGYADINA VIDAINKGQV YKYFSKPWND DELRQNIDKA
YEVYALRKEN KELTAKLLDV NEKLEFLLRQ KLIS