More than 300 homologs were found in PanDaTox collection
for query gene Phep_1525 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_1525  ATP-binding region ATPase domain protein  100 
 
 
359 aa  733    Pedobacter heparinus DSM 2366  Bacteria  normal  0.331233  normal  0.636632 
 
 
-
 
NC_013132  Cpin_1315  response regulator receiver sensor signal transduction histidine kinase  53.76 
 
 
365 aa  391  1e-107  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2392  response regulator receiver sensor signal transduction histidine kinase  42.94 
 
 
363 aa  300  2e-80  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  55.41 
 
 
154 aa  172  9e-42  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_008255  CHU_3454  histidine kinase  34.37 
 
 
439 aa  162  6e-39  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0351684 
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  52.08 
 
 
154 aa  160  3e-38  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2879  PAS/PAC sensor signal transduction histidine kinase  36.25 
 
 
819 aa  155  1e-36  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  decreased coverage  0.000152143 
 
 
-
 
NC_008255  CHU_3091  sensor histidine kinase  39.66 
 
 
444 aa  155  1e-36  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1529  response regulator receiver  51.43 
 
 
151 aa  152  5.9999999999999996e-36  Pedobacter heparinus DSM 2366  Bacteria  normal  0.542106  normal 
 
 
-
 
NC_008255  CHU_3029  PAS/PAC sensor signal transduction histidine kinase  36.36 
 
 
461 aa  147  2.0000000000000003e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.20083  normal 
 
 
-
 
NC_008255  CHU_2081  response regulator receiver sensor signal transduction histidine kinase  28.84 
 
 
396 aa  146  6e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.281834 
 
 
-
 
NC_008255  CHU_0317  sensor histidine kinase  35.62 
 
 
737 aa  142  9.999999999999999e-33  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.824856  normal 
 
 
-
 
NC_013037  Dfer_2388  response regulator receiver protein  46.53 
 
 
154 aa  139  6e-32  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.319662 
 
 
-
 
NC_007517  Gmet_3476  response regulator receiver modulated metal dependent phosphohydrolase  47.3 
 
 
479 aa  132  6.999999999999999e-30  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0202  response regulator receiver sensor signal transduction histidine kinase  27.57 
 
 
374 aa  128  2.0000000000000002e-28  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007973  Rmet_2950  response regulator receiver sensor signal transduction histidine kinase  23.94 
 
 
378 aa  127  3e-28  Cupriavidus metallidurans CH34  Bacteria  normal  0.37884  normal 
 
 
-
 
NC_007347  Reut_A2813  response regulator receiver sensor signal transduction histidine kinase  24 
 
 
377 aa  127  4.0000000000000003e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.963287  n/a   
 
 
-
 
NC_007908  Rfer_1982  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.15 
 
 
1355 aa  126  5e-28  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  29.97 
 
 
379 aa  125  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_008255  CHU_3468  sensor histidine kinase  35.81 
 
 
651 aa  122  9e-27  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.355091 
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  29.7 
 
 
379 aa  122  9.999999999999999e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  41.8 
 
 
303 aa  121  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  27.02 
 
 
355 aa  120  3e-26  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_008255  CHU_1092  aerobic respiration sensor-response protein; histidine protein kinase  29.48 
 
 
584 aa  120  4.9999999999999996e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.962322  normal 
 
 
-
 
NC_009656  PSPA7_2273  putative two-component response regulator  41.8 
 
 
304 aa  119  9e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.438912  n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  41.3 
 
 
438 aa  119  9e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3477  PAS/PAC sensor hybrid histidine kinase  42.25 
 
 
1465 aa  118  9.999999999999999e-26  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  40.51 
 
 
270 aa  119  9.999999999999999e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  27.16 
 
 
386 aa  118  1.9999999999999998e-25  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  33.68 
 
 
317 aa  118  1.9999999999999998e-25  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_002939  GSU0149  sensor histidine kinase/response regulator  26.37 
 
 
371 aa  116  6e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2524  response regulator receiver protein  38.66 
 
 
137 aa  116  6e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_0050  two component, sigma54 specific, transcriptional regulator, Fis family  39.86 
 
 
515 aa  115  7.999999999999999e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0532507 
 
 
-
 
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  28.72 
 
 
374 aa  115  8.999999999999998e-25  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_1956  integral membrane sensor signal transduction histidine kinase  32.2 
 
 
477 aa  115  1.0000000000000001e-24  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  42.98 
 
 
557 aa  115  1.0000000000000001e-24  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_008312  Tery_3155  adenylate/guanylate cyclase  36.13 
 
 
1172 aa  115  1.0000000000000001e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  0.386213  hitchhiker  0.00095291 
 
 
-
 
NC_004578  PSPTO_2715  sensor histidine kinase/response regulator  25.99 
 
 
393 aa  114  2.0000000000000002e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.615592  n/a   
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  43.97 
 
 
492 aa  114  2.0000000000000002e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.224656 
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  27.92 
 
 
396 aa  114  2.0000000000000002e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  27.92 
 
 
396 aa  114  2.0000000000000002e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_008609  Ppro_2723  putative PAS/PAC sensor protein  37.58 
 
 
285 aa  114  3e-24  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  44.17 
 
 
491 aa  113  5e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  38.3 
 
 
315 aa  113  5e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  44.17 
 
 
491 aa  113  5e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0224  response regulator receiver sensor signal transduction histidine kinase  26.88 
 
 
379 aa  113  5e-24  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2448  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  24.49 
 
 
393 aa  113  6e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.760608  hitchhiker  0.00120668 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  37.75 
 
 
473 aa  113  6e-24  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  35.23 
 
 
452 aa  112  8.000000000000001e-24  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3472  response regulator receiver domain-containing protein  37.2 
 
 
187 aa  112  8.000000000000001e-24  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.48 
 
 
994 aa  112  9e-24  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  41.32 
 
 
557 aa  112  9e-24  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_01019  Putative signal protein with GGDEF, EAL and two component receiver domains  42.42 
 
 
549 aa  112  1.0000000000000001e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.159296  n/a   
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  42.37 
 
 
823 aa  112  1.0000000000000001e-23  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2721  response regulator receiver protein  44.63 
 
 
188 aa  112  1.0000000000000001e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_06147  Putative signal protein with GGDEF, EAL and two component receiver domains  42.42 
 
 
549 aa  112  1.0000000000000001e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.0015374  n/a   
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  39.29 
 
 
439 aa  112  1.0000000000000001e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3109  two component, sigma54 specific, Fis family transcriptional regulator  40.32 
 
 
493 aa  112  1.0000000000000001e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  40 
 
 
1180 aa  111  2.0000000000000002e-23  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_011071  Smal_1912  cyclic nucleotide-binding protein  44 
 
 
590 aa  111  2.0000000000000002e-23  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0713503  normal  0.243299 
 
 
-
 
NC_007651  BTH_I0615  response regulator  38.41 
 
 
484 aa  111  2.0000000000000002e-23  Burkholderia thailandensis E264  Bacteria  normal  0.177724  n/a   
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  40 
 
 
1156 aa  110  3e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_010725  Mpop_5416  multi-sensor signal transduction histidine kinase  28.84 
 
 
632 aa  110  3e-23  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0300  multi-sensor signal transduction histidine kinase  28.3 
 
 
887 aa  110  3e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.328128  normal  0.0126688 
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  23.69 
 
 
417 aa  110  3e-23  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_008609  Ppro_2716  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.1 
 
 
629 aa  110  3e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2577  sensor histidine kinase  30.74 
 
 
349 aa  110  4.0000000000000004e-23  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2447  signal transduction protein  36.91 
 
 
965 aa  110  5e-23  Methylibium petroleiphilum PM1  Bacteria  normal  0.936876  normal 
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  23.38 
 
 
396 aa  109  7.000000000000001e-23  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_012918  GM21_2367  response regulator receiver modulated metal dependent phosphohydrolase  40.28 
 
 
538 aa  109  8.000000000000001e-23  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  41.32 
 
 
553 aa  109  9.000000000000001e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0261  response regulator  36.42 
 
 
439 aa  108  1e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2689  response regulator  36.42 
 
 
481 aa  108  1e-22  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0923  response regulator  36.42 
 
 
481 aa  108  1e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2388  response regulator  36.42 
 
 
481 aa  108  1e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_5980  response regulator receiver modulated metal dependent phosphohydrolase  31.91 
 
 
469 aa  108  1e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6276  response regulator receiver modulated metal dependent phosphohydrolase  31.91 
 
 
469 aa  108  1e-22  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_2469  response regulator  36.42 
 
 
481 aa  108  1e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  0.129941  n/a   
 
 
-
 
NC_009076  BURPS1106A_0757  response regulator/HD domain-containing protein  36.42 
 
 
481 aa  108  1e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3728  response regulator receiver sensor signal transduction histidine kinase  22.05 
 
 
395 aa  108  1e-22  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.439666  normal  0.0786529 
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  36.42 
 
 
470 aa  108  2e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0731  response regulator  31.41 
 
 
476 aa  107  2e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  40 
 
 
311 aa  108  2e-22  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_007973  Rmet_1542  response regulator receiver domain-containing protein  34.51 
 
 
309 aa  108  2e-22  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000150385  normal  0.319028 
 
 
-
 
NC_008255  CHU_0675  aerobic respiration sensor-response protein; histidine protein kinase  30.23 
 
 
646 aa  108  2e-22  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.779748  normal 
 
 
-
 
NC_011757  Mchl_5360  PAS/PAC sensor signal transduction histidine kinase  28.3 
 
 
632 aa  108  2e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1119  sensor histidine kinase/response regulator  27.37 
 
 
420 aa  107  3e-22  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0720  response regulator receiver, fis type  40.83 
 
 
312 aa  107  3e-22  Psychrobacter arcticus 273-4  Bacteria  normal  0.935409  normal 
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  28.82 
 
 
495 aa  107  3e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4875  PAS sensor protein  27.99 
 
 
632 aa  107  3e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.152822  normal 
 
 
-
 
NC_010682  Rpic_2976  response regulator receiver sensor signal transduction histidine kinase  22.85 
 
 
368 aa  107  3e-22  Ralstonia pickettii 12J  Bacteria  normal  0.598418  normal 
 
 
-
 
NC_008312  Tery_3971  putative GAF sensor protein  31.72 
 
 
312 aa  107  3e-22  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2566  response regulator receiver sensor signal transduction histidine kinase  23.59 
 
 
369 aa  107  4e-22  Ralstonia pickettii 12D  Bacteria  normal  normal  0.236818 
 
 
-
 
NC_011832  Mpal_2461  PAS/PAC sensor signal transduction histidine kinase  27.27 
 
 
575 aa  106  5e-22  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  35.76 
 
 
472 aa  106  5e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  35.76 
 
 
472 aa  106  5e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  34.44 
 
 
449 aa  106  6e-22  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_009074  BURPS668_0745  response regulator/HD domain-containing protein  35.76 
 
 
481 aa  106  7e-22  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0064  histidine kinase  23.8 
 
 
598 aa  106  7e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_4917  Signal transduction histidine kinase-like protein  26.56 
 
 
486 aa  106  7e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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