| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1912 |
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| Symbol | |
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| ID | 6475937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2149252 |
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| End bp | 2151024 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642731094 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_002028299 |
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| Protein GI | 194365689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0713503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.243299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAATC CCAACCAGCC GCCGGTCAGC ATCGATGATG CCCCCGACCG CCTCGGCGCC
GGCAACCCCG AACTGCAGGT GATGGTCGCC GAAGCCGCCT CCGGGGGTAC CCCGCTGATG
TTGATGCACG TGGACATCGA CCACTTCGCA TCGGTCAACG AGAACATGAG CGCCGAGGTG
GGTGACCAGG CACTGGTGCT GGTGGCACAA CGGCTGCAGT CCTACCTGCG CGGTCGCGGC
AAGCTGTGGC GCCACGGCAG CGACGAGTTC CTGATCGCCG TTCCGCGCAC CGTCGAGGTG
CCGCTGCCGG AGGACTTCGC CGAGGAAATC CGCCAACAGA TGGAGCTTCC GCTGTCGGTG
CTGCCGTACA CGCTGTTCAT GACCGGCAAG CTGGGGGTGA GCCTGTGCCC GGAACACGCC
AGCAGCACCT CGCGCCTGCT CGACCACGCC GAGGACGCCC TGTACCAGGC TGCCCGCGAA
GGGGGCAACG CCGTGCGCAT CCACGCCGTG GACACGCCGC CGAGCGCGCA CAGTGAAAGC
ATCATCGCGC GGCAGATCGT CGATGCCATT CCCAACGGCG AGCTGAAGCT GCGCTACCAG
CCGCTGGTCA GTGCCCGCGA CGGCCACGTG GTGGGCATGG AAGCGCTGCT GCGCTGGCAG
TCGCCGACGC TGGGCATGCT GGTGCCGGAA CGCTTCATGC GCACGGCAGA GCGGCTGGGC
ATCATCGTGC AGATCGGCAC CTGGGTACTG GAGGGTGCGC TGAAGCAGGC GCGTCTGTGG
CGCGACCAGG GCTTCGACGA CTTCACCATT GCGGTGAACG TATCGACCCT GCAGCTGCTG
CGGCCGAACT TCTTTGCCGA AGTGATGGGG GTGATCCAGG CCTCGGGCGT GCCGGCGCAG
ATGCTGACGC TGGAAATCAA CGAAAGCGCA CTGACCAACA ACGTCAACTT CGTTCACGAG
ACGCTGGCCA ACCTGCGCAA CGAAGGCATC AGCCTGAGCC TGGACAACTT CGGCACCGGC
GACTCCAGCC TGAGCGCGCT GGTGCGCTAC CCGGTGGACA AGCTGAAGAT CGACCGCAGC
TTCATCAAGA GCGCGCCGGC CGGCAACCGC GAGGCCGCCA TCGCCCGCGC CATCATCGCG
ATGGGCCACC AGCTGGGCAT GACGGTGATT GCCAATGGCG TGGAATCGCA GGCACAGCTT
GGCTTCCTGC GCCGCAACGA CTGCGATGTG TTCCAGGGCT ATCTGTTCGG CGAGCCGATG
TCGGCCGATG CCGCCGGCAT GACCCTGCGC CGTCGCTACC TGCGCCCGGA AGCGTTCGCC
GAAACGCGGC CGGACCGCAC CCTGCTGCTG CTGGACGACG AAGAAAACGT GCTGCGCTCG
CTGGTGCGCC TGTTCCGTCG CGACGGCTAC CGCATCCTGG CCGCCGGCAA CGTGCGCGAT
GCGTTCGACC TGCTGGCGAT CAACGACGTG CAGGTGATCC TGTCCGACCA GCGCATGAGC
GACATGAGCG GTACCGAGTT CCTCGGCCGG GTGAAGATGC TGTACCCGGA CACGATCCGC
CTGGTGCTGT CCGGCTACAC CGATCTGAAC ACGGTGACCG ATGCGATCAA CCGTGGTGCG
ATCTACCGGT TCCTGACCAA GCCGTGGAAC GACGACGAGC TGCGCAAGCA CATCCACCAG
GCGTTCCGCA CCTACGAGGA ACAGCGCCGC AGCAATGCCG GGCCGGCGCC GGCTGAACCA
GTCGATGGCG GCGAGGATCG TCCGTTGCGG TAA
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| Protein sequence | MWNPNQPPVS IDDAPDRLGA GNPELQVMVA EAASGGTPLM LMHVDIDHFA SVNENMSAEV
GDQALVLVAQ RLQSYLRGRG KLWRHGSDEF LIAVPRTVEV PLPEDFAEEI RQQMELPLSV
LPYTLFMTGK LGVSLCPEHA SSTSRLLDHA EDALYQAARE GGNAVRIHAV DTPPSAHSES
IIARQIVDAI PNGELKLRYQ PLVSARDGHV VGMEALLRWQ SPTLGMLVPE RFMRTAERLG
IIVQIGTWVL EGALKQARLW RDQGFDDFTI AVNVSTLQLL RPNFFAEVMG VIQASGVPAQ
MLTLEINESA LTNNVNFVHE TLANLRNEGI SLSLDNFGTG DSSLSALVRY PVDKLKIDRS
FIKSAPAGNR EAAIARAIIA MGHQLGMTVI ANGVESQAQL GFLRRNDCDV FQGYLFGEPM
SADAAGMTLR RRYLRPEAFA ETRPDRTLLL LDDEENVLRS LVRLFRRDGY RILAAGNVRD
AFDLLAINDV QVILSDQRMS DMSGTEFLGR VKMLYPDTIR LVLSGYTDLN TVTDAINRGA
IYRFLTKPWN DDELRKHIHQ AFRTYEEQRR SNAGPAPAEP VDGGEDRPLR
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