| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06147 |
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| Symbol | |
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| ID | 6306247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2799906 |
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| End bp | 2801555 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642640008 |
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| Product | Putative signal protein with GGDEF, EAL and two component receiver domains |
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| Protein accession | YP_001913867 |
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| Protein GI | 188576938 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0015374 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGCATT TAGTCGATGC GGCCGCGTCC GGCGGCCCGC CGCTGATGAT TTTCCACGTC
GACATCGATC ACTTCGCCTC GATCAACGAG AACATGAGTG GCGAGGTCGG CGACCAGGCG
CTGACATTGG CCGCGCGTCG CCTTCAGGAG TTTCTCGGAA CCCGCGGCAA ACTGTGGCGT
CATGGCAGCG ATGAGATGAT CGTGGTGGCA GTGCGCCGGG AAGACACACC GCTGCCGGAA
GACTTCGCCG AAGAAATCCG CCAGCAACTG GAATTGCCGC TGTCGGTGTT GCCGTACACG
TTGTTCATGA CTGGCAAGGT CGGCATCAGC CTGTGCCCGG AGCATTCCAC CGCGGTGTCC
ACGCTCCTGG ACTATGCCGA AGAAGCCAGC TACCAGGCGG CACGCGAAGG CGGCAACACG
GTGCGGCTGT ACACCCGCAA CTCGGCCACC AACGCGCATA GCGAAAGCAT CATTGCGCGG
CAGATCGTCG ATGCGATTCC GCACGGCGAA TTACGCCTGC GCTACCAACC GCTGGTGAGC
GCGCGCGACG GCCGCATCGT TGGCATGGAG GCGCTGCTGC GCTGGCAGTC GCCGACCCTG
GGCATGCTGG TACCGGAGCG CTTCATGCGC ACCGCCGAGC GCCTGGGCGT GATCGTGCAG
ATCGGCGAAT GGGTACTGCA GAACGCGGTG CGTCAGGCGC GTTTATGGCG CGACCAGGGC
TTCGATGACT TCAGCATTGC GATAAACGTC TCCACGCTGC AGCTGCTGCG CCCGGGCTTC
TTCAACGAAG TGATGGCGAT GCTGCAGACC GCCGGTGTGC CGGCGCAGTT CGTCACGCTG
GAGATCAACG AAAGCGCGTT GACCAACAAC GTCAACTTCG TCCACGAGAC GATGGCCAAC
CTGCGCAACG AAGGCATCAG CCTGAGCCTG GATAACTTCG GCACCGGCGA TTCCAGTCTG
AGCGCGCTGG TGCGCTACCC GGTGGACCGG CTGAAGATCG ACCGCAGTTT CATCAAAAGC
GCACCTGCCG GCAGCCGCGA GGCGGCGATT GCGCGCGCCA TCATCGCCAT GGGTCACCAG
CTCGGCATGA CGGTCATTGC CAACGGGGTG GAATCGCAGG CGCAATTGGG CTTCCTGCGT
CGCAACGATT GCGACATCTT CCAGGGCTAT CTGTTCGGTG AACCGATGTC GGCCGAGTCG
GCCGGCATGG CACTGCGGCG CCGCTACCTG CGCCCGGAAT CGTTCGCCGA AAGCCGCCCT
GATCGCACCT TGCTGCTGCT GGACGACGAA GAGAACGTGC TGCGCTCGCT GGTGCGCCTG
TTCCGTCGCG ATGGCTACCG GATTCTGGCC GCCGGCAACG TGCGCGACGC CTTCGACCTG
CTCGCCACCA ACGACGTGCA GGTGATCCTT TCCGATCAGC GCATGAGCGA CATGAGCGGC
ACCGAGTTCC TGGGCCGGGT CAAGATGCTC TACCCCGATA CGGTGCGCCT GGTGCTCTCC
GGCTACACGG ACCTGGCCAC GGTCACCGAA GCCATCAACC GTGGCGCGAT CTACCGCTTC
CTGACCAAAC CCTGGAACGA CGACGAACTG CGCGAGCATA TTCGTCAGGC CTTCCGCACG
CATGACGAGT TGCGGAACGG CCGGGAATAG
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| Protein sequence | MLHLVDAAAS GGPPLMIFHV DIDHFASINE NMSGEVGDQA LTLAARRLQE FLGTRGKLWR
HGSDEMIVVA VRREDTPLPE DFAEEIRQQL ELPLSVLPYT LFMTGKVGIS LCPEHSTAVS
TLLDYAEEAS YQAAREGGNT VRLYTRNSAT NAHSESIIAR QIVDAIPHGE LRLRYQPLVS
ARDGRIVGME ALLRWQSPTL GMLVPERFMR TAERLGVIVQ IGEWVLQNAV RQARLWRDQG
FDDFSIAINV STLQLLRPGF FNEVMAMLQT AGVPAQFVTL EINESALTNN VNFVHETMAN
LRNEGISLSL DNFGTGDSSL SALVRYPVDR LKIDRSFIKS APAGSREAAI ARAIIAMGHQ
LGMTVIANGV ESQAQLGFLR RNDCDIFQGY LFGEPMSAES AGMALRRRYL RPESFAESRP
DRTLLLLDDE ENVLRSLVRL FRRDGYRILA AGNVRDAFDL LATNDVQVIL SDQRMSDMSG
TEFLGRVKML YPDTVRLVLS GYTDLATVTE AINRGAIYRF LTKPWNDDEL REHIRQAFRT
HDELRNGRE
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