| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2716 |
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| Symbol | |
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| ID | 4573445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2962285 |
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| End bp | 2964174 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639756772 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_902376 |
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| Protein GI | 118581126 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGATA CGTATCAGGT GGAGTACCGG CGAAAAACAA AAACGGGCGA ATGGAAATGG
ATTCTGGCCT ACGGCAAGGT GGTGGCGAGG GACGAGGCTG GCGCCCCGCT CAGGATGCTC
GGAACGATTG CCGACATACA CGAGCGCAAA CAAAACGAGC AGCAACTGGC CTATCTGGCT
ACCCACGATG AATTGACCGG ACTGGCCAGC CGGGCGTTGT TGTATGACCG CCTGGAACAG
TCGCTGTATT ACGCCCGCCG TTCCGGACGG ATCCTGGCGG TGCTGTTGCT GGACCTGGAC
CGTTTCAAGG TCATTAACGA CAGTCTCGGC CACGAATTCG GCGACAACCT GCTGAAAGCC
GTTGCTCTTC GCCTGCAACA GGTCATACGC GAAGGGGACA CCGCGGCCCG GTTCGGGGGG
GACGAATTCG TCATTCTGCT GGCTGAGGTG GCTGACCCGG ATGACGTGGG GATGCTGGCG
GGCAGGATTC TGCGCTGCCT CGAGCCACCT CATCTGATCG ACGGCAAGGA GGTCACCGTA
TCCGCCAGTC TGGGAATCAG CCTGTTTCCC AGGGACAGCG ACGATGACGC CACCCTGATC
CGCAACGCTG ATATTGCCAT GTATCGGGCC AAGCGGGAGG GGGGGGGCTC ATTCTCCTTT
TTTTCCCCCG AGATGAACCA GCGGGCCATG GAGACTTTGG AAACGGAAAA CGCTCTGCGC
CAGGCGCTGG ACCGGAGTGA ATTTCTGCTG CATTACCAAC CCAAGGTTGA ATTGGCCACA
GGTCGGATGA TTGGTTGCGA AGCATTGGTC CGCTGGCTGC ATCCGCAACG AGGAATGGTG
CCGCCGAACG AATTCATTCC TCTGGCCGAA GAGACCGGCC TGATTGTGCC GCTGGGAAAC
TGGGTACTGA CGGAGGCCTG CCGGCAGGTG CGTGCCTGGC AGGACGAAAG ACTGCCGATC
GTGAGTGTGG CGGTCAATCT CTCAGCCCGG CAGTTTCGCG CGGGGAAGTT GCCGTGGCTG
GTCGCGAACG TCCTGCTGGC AACCGGTCTC GACCCCTGCT GGCTGGAGCT TGAGATGACC
GAAAGCCTGG TGATGGACAA TCCTGAACGG GCTATTGCAC TGATGCGGGA GCTGAAAGAC
ATCGGTGTTC GGCTGAGCAT GGACGATTTC GGCACCGGCT ACTCGAGTTT AGCCAGTTTA
AGCCGTTTTC CCATCGACTA CCTGAAAATC GACCGCTCCT TTGTTACCGA TATCGTCACC
AACCCGCACT CGGCCACTAT CGCCGCTTCG ATCATCGACA TAGCGCACCG TATGCAGCTC
CAGGTAATCG CGGAAGGGGT GGAGGCCGAG GCCCAGCTTG GCTATCTGCG CAAACATGGC
TGCGATCAGA TTCAGGGCTA TTTTTTCAGT CGTCCCCTGG CCGCCAATGA CTTTGCTGCA
TTGCTGCGAA AAAATACGCC ATACGTCATT CCGTCCCATG GCACTATGGC TCGTACGTTG
CTGTTAGTTG ATGACGAGCG CAATATCCTC CGGGCGTTAA AGCGGCTCCT TGCTGAAGAG
GACTACCGCA TCGTTACCGC AGGCAATGCC TGTGAAGGGC TGGAGTTGCT GGCCAGGGAA
AGCATCCAGG TGGTGATTTC GGATCAGCGC ATGCCGGATA TGAGCGGAAC CGAGTTTTTA
AGACTGGTCA AAGCGCTGCA TCCCGATACG GTGCGCATTA TCCTGTCCGG TTTTGTCGAT
CTTGAAACCG TCACCAAAGC AGTGAACGAG GGGGAGGTAT ACAAGGTGCT CACAAAGCCG
TGGGACGATG GCCAGTTGCG CAAGATCATC CGGGACTCTT TCCGCGTGTA CGAGCAGTCC
GCCATTGTCC GCCGAACGGG ATTGCCATAG
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| Protein sequence | MRDTYQVEYR RKTKTGEWKW ILAYGKVVAR DEAGAPLRML GTIADIHERK QNEQQLAYLA
THDELTGLAS RALLYDRLEQ SLYYARRSGR ILAVLLLDLD RFKVINDSLG HEFGDNLLKA
VALRLQQVIR EGDTAARFGG DEFVILLAEV ADPDDVGMLA GRILRCLEPP HLIDGKEVTV
SASLGISLFP RDSDDDATLI RNADIAMYRA KREGGGSFSF FSPEMNQRAM ETLETENALR
QALDRSEFLL HYQPKVELAT GRMIGCEALV RWLHPQRGMV PPNEFIPLAE ETGLIVPLGN
WVLTEACRQV RAWQDERLPI VSVAVNLSAR QFRAGKLPWL VANVLLATGL DPCWLELEMT
ESLVMDNPER AIALMRELKD IGVRLSMDDF GTGYSSLASL SRFPIDYLKI DRSFVTDIVT
NPHSATIAAS IIDIAHRMQL QVIAEGVEAE AQLGYLRKHG CDQIQGYFFS RPLAANDFAA
LLRKNTPYVI PSHGTMARTL LLVDDERNIL RALKRLLAEE DYRIVTAGNA CEGLELLARE
SIQVVISDQR MPDMSGTEFL RLVKALHPDT VRIILSGFVD LETVTKAVNE GEVYKVLTKP
WDDGQLRKII RDSFRVYEQS AIVRRTGLP
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