Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5360 |
Symbol | |
ID | 7116277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 5746385 |
End bp | 5748283 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643528052 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002424048 |
Protein GI | 218533232 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3300] MHYT domain (predicted integral membrane sensor domain) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTCCA CCGGCTACAA TCCGGCTCTC GTGGCGCTGT CCCTCGCCAT CGCCGTGCTC GCCTCCTACA CGGCGCTCGA TCTCGGCGGC CGCGTGCGGG CCGCCGCATC CGGACTGGGC TGGGCTTGGC TTCTGGGTGC CGCCCTGGCG ATGGGGGGCG GCATCTGGTC GATGCACTTC GTCGGGATGC TGGCCTTCGA GATGGGCCTG CCCGCCGCCT ACGACCTCGG CCACACCTTC CTGTCCCTGC TCATCGCCAT TGGGACGACC GGCGCGGCCC TGGCCTGGGT CGGCCGTCGG CGGGCCGGCC GCTGGGATGT CCTCGTCGCG GGCCCCGTGA TGGGAATCGG CGTGGCAGCG ATGCACTATA CCGGGATGGC CGCGATGCGG ATGCCCGGCC ATCTCGCTTA CAGCGTGCCG GTCGTCACGC TCTCGGTCGG GATCGCCATC ACCGCGGCGA CCATCGCCCT GTGGCTGACC TTTCGGCCGA CGAGCGTCTG GCAGCGCTTC GCCGCCGCCC TGATCATGGG CGTTGCGGTA GCCGGGATGC ACTATACCGG CATGGCGGCC GCGACGATCA CCGCCGAGGA AGCCGGCGCC CATTCCGCCC ATCTCGCCGC GACGAGCGTG GATCAGCAGA ATCTCGCCCT CTACGTCGCC GGGGTGACCT TCGTGATCCT GTTCCTCGCG ATGCTCGCCT CCGCTTTCGA TCAGCAGCGG ATCCAGGGTG AGTTGCGGGC GAGCGAGGAG CGTTTCCGTG CCGCCGTACA GGCCGTGCGC GGCGTGTTGT GGACCAACGA CCCGCAGGGG CGGATGACGG GCGAACAACC CGGCTGGACC GCCCTCACGG GACAAACCCG CACCGAGTAC GAGGGCTTTG GCTGGGCCGA CGCGGTGCAT CCGGAGGACC GGCAAGCGAG CGTCGAGGCT TGGAATGCGA CCGTTGCCGC CCGCAGCACC TTCCTGCACG AGCATCGGGT GCGCGCCCGG GACGGCCTGT GGCGACATTT CTCGATCCGC GCGATCCCCG TGCTCGACCC GCACGGCGCC ATCCGCGAAT GGGTCGGCGT CCATACCGAC ATCACCGAGC AGCGCGAGGC CGAAGCCGAA TTGCGGGAGT CGAACGAGGA GATCCAGCGC TACGCCTACA TCGTGAGCCA CGACCTGCGC GCGCCGCTCG TCAACGTCAT GGGTTTCACG AGCGAGTTGG AGGCGGTGCG CCAGGAATTG CGTACGGTGC TGCGTGACCA TCCGCAGGGC GCGCGGATCG ATGAGGACAT CACCGAGGCG CTGAGCTTCA TCCAGGCGGC GATCGTCAAG ATGGAGCGCT TGATCGCCGC CATCCTGAAG CTTTCGCGGG AGGGGCGGCG CCGGTTCAGC CCGGAGCCGC TCGCGATGTC ATCCGTGATC CGCGGCATCG CCGACGCGCA GCGTCATCAG GCCGGGCGCA AGGGTGTGAC GGTGACGGTA GCCGACGATC TTCCCTCGAT CGTGGCCGAC CGGCTCGCCG TGGAACAGGT TTTCGGCAAC CTGATCGACA ACGCCCTCAA ATATCTCGAT CCGGCCCGCC CCGGAACGAT CGTGGTCACG GCCCGACCTG CACCCGGCAA CCGAGTCCGT TTTGACGTCT CCGACACCGG GCGAGGTATC GCGCCGCAGG ATCATGGCCG CATCTTCGAG CTGTTCCGGC GGTCCGGCAC GCAGGATCAG CCGGGGGAGG GGATCGGGCT CGCCAGCGTG AAAGCATTGG TGCGCGCGCT CGGCGGCCGG ATCGAGGTTT CGTCACAACC CGGTGTCGGC ACAACCTTTA TCGTGACGCT GCCGCGCGAG CCGGTTACAG GCCGAGGCGG GGCCGCGACA CTCGATCCTC CCGATACGAT GACCCTGGCC GCGGAGTAG
|
Protein sequence | MVSTGYNPAL VALSLAIAVL ASYTALDLGG RVRAAASGLG WAWLLGAALA MGGGIWSMHF VGMLAFEMGL PAAYDLGHTF LSLLIAIGTT GAALAWVGRR RAGRWDVLVA GPVMGIGVAA MHYTGMAAMR MPGHLAYSVP VVTLSVGIAI TAATIALWLT FRPTSVWQRF AAALIMGVAV AGMHYTGMAA ATITAEEAGA HSAHLAATSV DQQNLALYVA GVTFVILFLA MLASAFDQQR IQGELRASEE RFRAAVQAVR GVLWTNDPQG RMTGEQPGWT ALTGQTRTEY EGFGWADAVH PEDRQASVEA WNATVAARST FLHEHRVRAR DGLWRHFSIR AIPVLDPHGA IREWVGVHTD ITEQREAEAE LRESNEEIQR YAYIVSHDLR APLVNVMGFT SELEAVRQEL RTVLRDHPQG ARIDEDITEA LSFIQAAIVK MERLIAAILK LSREGRRRFS PEPLAMSSVI RGIADAQRHQ AGRKGVTVTV ADDLPSIVAD RLAVEQVFGN LIDNALKYLD PARPGTIVVT ARPAPGNRVR FDVSDTGRGI APQDHGRIFE LFRRSGTQDQ PGEGIGLASV KALVRALGGR IEVSSQPGVG TTFIVTLPRE PVTGRGGAAT LDPPDTMTLA AE
|
| |