Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5416 |
Symbol | |
ID | 6309807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 5793459 |
End bp | 5795357 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642654098 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001928043 |
Protein GI | 188584598 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCACA CCGGCTACAA TCCGGCCCTC GTGGCGCTGT CCCTCGCCAT CGCCGTGCTC GCCTCCTACA CGGCGCTCGA CCTCGGCGGG CGTGTGCGCG GGACCACCTC GCGGCTGCGC TGGGCTTGGC TCCTCGGGTC CGCCCTGGCG ATGGGGGGCG GCATCTGGTC GATGCACTTC GTCGGCATGC TGGCCTTCGA GATGGGCCTG CCCGCCGCCT ACGATGTCGG CCACACGCTC CTGTCCCTGG TGATCGCGAT CGGCGTGACG GGTGCGGCGC TGGCTTGGCT CGGCCGGAGC CGGGCCGGAC GCTGGGATGT CCTCATCGCC GGTCCGGTGA TGGGGATCGG CGTGGCCGCG ATGCATTACA CCGGGATGGC CGCCATGCGG ATGCCCGGCC ATCTCGCCTA CAGCCTGCCG GTCGTGGCGC TGTCCGTCGG AATCGCCGTC ACCGCCGCGA CCGTGGCCCT GTGGCTCACC TTTCGGCCGA CCAGCATCTG GCAGCGCTTC GCCGCCGCGC TGATCATGGG CGTGGCGGTC GCCGGGATGC ATTATACCGG CATGGCGGCA GCGACGATCA CCGCCGAGGA GGCAGGCGCG CATTCCGCGC ATTTCGCCGC CACGAGCGTG GATCAGCAGA ACCTCGCCCT CTACGTCGCA GGCATCACCT TCGTGATCCT GTTCCTTGCC ATGCTCGCCT CCGCCTTCGA CCAGCAGCGG ATCCAGGGCG AACTGCAGGC GAGCGAGGAA CGATTCCGGG CCGCCGTGCA GGCCGTGCGC GGCGTCCTGT GGACCAACGA TCCGCAGGGC CGGATGACCG GCGAGCAACC GGGTTGGGCC GCGCTCACCG GACAGAGCCG GGCTGAGTAC GAGGGCTTCG GCTGGGCCGA GGCCGTGCAC CCGGACGACC GCCAGGCGAG CATCGAGACC TGGAACGCGA CGGTGGCCGC CCGCAGCACC TTCGTCCACG AGCACAGGGT GCGGGCCCGG GACGGGCTGT GGCGGCATTT CTCGATCCGC GCGATCCCGG TGCTCGACGC GCAGGGCGCC ATCCGCGAAT GGGTCGGCGT GCACACCGAC ATCACCGATC AGCGCGAGGC CGAGGCCGAG CTGCGGGAAT CGAACGAGGA GATCCAGCGC TACGCCTATA TCGTCAGCCA CGACCTGCGC GCGCCGCTCG TCAACGTGAT GGGCTTCACC AGCGAGCTGG AAGCCGTGCG CCAGGAGTTG ACGACGCTGC TGCGCGACCA TCCGCAGGGC GCGCGGATCG ATGACGACAT CACGGAAGCG CTGAGCTTCA TCCAGGCGGC GATCGTGAAG ATGGAGCGCC TGATCGCGGC CATCCTGAAG CTGTCGCGGG AGGGGCGGCG CCAATTCATC CCTGAGACGA TCGCGATGAC GCCCCTCATC CGCGGCATCG CCGACGCGCA GCGTCATCAA GCCGACCGCA AGGGCGCAAC GGTGAGGGTG GCGGCGGATC TTCCCGCGAT CATCGCCGAC CGTCTCGCCA TCGAGCAGAT CTTCGGCAAC CTCATCGACA ACGCCCTCAA ATATCTCGAT CCGGCCCGGC CCGGCCGGGT CGAGGTCACG GCAGCGCCCG CGCCGGGCGA CCGGATCCGC TTCGCCGTGT CCGATAACGG GCGGGGCATC GCGCCTCAGG ATCACGGCCG CATCTTCGAG CTGTTCCGGC GCTCCGGGGC GCAGGACCAG CCGGGTGAGG GGATCGGGCT CGCCAGCGTG AAGACTCTGG TGCGCGCGCT CGGCGGGCGG ATCGAGGTCT CGTCGCAGCC GGGGACGGGC ACAACCTTTG TCGTGACGTT GCCCCGCGAG CCGGTTACAG GCCGAGGCGA GGCCGCGAAA TCCCATCCTC CCGAAACGAT GCCCCTGGCC GCGGAGTAA
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Protein sequence | MVHTGYNPAL VALSLAIAVL ASYTALDLGG RVRGTTSRLR WAWLLGSALA MGGGIWSMHF VGMLAFEMGL PAAYDVGHTL LSLVIAIGVT GAALAWLGRS RAGRWDVLIA GPVMGIGVAA MHYTGMAAMR MPGHLAYSLP VVALSVGIAV TAATVALWLT FRPTSIWQRF AAALIMGVAV AGMHYTGMAA ATITAEEAGA HSAHFAATSV DQQNLALYVA GITFVILFLA MLASAFDQQR IQGELQASEE RFRAAVQAVR GVLWTNDPQG RMTGEQPGWA ALTGQSRAEY EGFGWAEAVH PDDRQASIET WNATVAARST FVHEHRVRAR DGLWRHFSIR AIPVLDAQGA IREWVGVHTD ITDQREAEAE LRESNEEIQR YAYIVSHDLR APLVNVMGFT SELEAVRQEL TTLLRDHPQG ARIDDDITEA LSFIQAAIVK MERLIAAILK LSREGRRQFI PETIAMTPLI RGIADAQRHQ ADRKGATVRV AADLPAIIAD RLAIEQIFGN LIDNALKYLD PARPGRVEVT AAPAPGDRIR FAVSDNGRGI APQDHGRIFE LFRRSGAQDQ PGEGIGLASV KTLVRALGGR IEVSSQPGTG TTFVVTLPRE PVTGRGEAAK SHPPETMPLA AE
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