Gene CHU_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2081 
SymbolarcB 
ID4183460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2430838 
End bp2432028 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content39% 
IMG OID638072081 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_678686 
Protein GI110638477 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.281834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAAAG AAAAAAGTGT TGATTGCTGT ATGCCTAACC CGGTTATGAA AACAATGGAA 
AAAATTAAAG TATTAATGCT TGAAGATGTT GATGATGATG TCACTATTAT TGAGAACGTG
CTTCAAAAAG CAGGTATTGA TCATTCCACA CTTCAGGTAG ATTCTAAATC TGAATTTATA
AAAGGCATTA AAGAATACCA GCCGGACGTA ATACTTTCTG ATCATTCCCT TCCGCAGTTC
AATTCCATTG AAGCACACAA AATCTGTTTA AATGAAAACC TGCTGATACC TTTTATCCTG
GTAACAGGCG CCGTTTCTGA AGAATTTGCC GTTACCTGTC TGAAACATGG TATCGACGAT
TACATTCTCA AATCTAACCT TTCCCGCTTA CCCAGTGCCA TCTTAACAGC GCTCCGCCAA
CGCGAACTTG AAAGAATGAA ACTTCAGGCC ATGCAGGAAT TAAAGGAGCA GAATGAACAG
ATCCTGAAAA TCAATAAAGA GCTGGATTCT TTTATTTACA GCATCTCACA CAGTTTACGC
GGACCGCTTT CAACGGTAAG CGGCTTGCTG CACCTGGCGG AAAAAGAATC GCAGGAAAAA
AATGATATGA GCGTGAAGGA ACTGCATCAG ATGATGGAAA CCTGTGTGAA GCGGTTGGAT
ACTACCTTGC GGCAAATGGT GGATCAATCT AAAAATGCAC GTCTGGAAGT TGATACAGAC
GCCATTGACA TCAACGCGCT GCTGGATAAA GCAATGAAAA ATGTTTCGTA TTTACCCGGC
TCCAATGAAG TAGAAGTTAC TATTATCAAT ACAGCGCAGG CTCCGTTTTA TTCAGATGCT
TATCGCTTAG AAGTTATCTT CAATAGTATT TTATCAAATG TCATTAAATA CCGCGATCCG
TATAAAGAGA AATCTGTTCT GCTTATTCAG GTGATCTGTA CACCTGAACA TGCTGCGATG
AGTTTTAAAG ATAATGGATT GGGGATTCCT GAAAAATTCA TGCCCAATAT TTTTAATATG
TTCTACCGGG CTTCTGAAAA AAGTGATGGC GCCGGATTGG GGCTCTATAT GGTAAAAGAA
TTTGTTGAAA AACTGAAAGG AAGTGTTACC GTTACTTCTG TTGACAACGA AAGTACCAGT
GTTACCATTG TGTTACCCAA TGTACGTAAG GATTATTCTG TTGATAATTA A
 
Protein sequence
MIKEKSVDCC MPNPVMKTME KIKVLMLEDV DDDVTIIENV LQKAGIDHST LQVDSKSEFI 
KGIKEYQPDV ILSDHSLPQF NSIEAHKICL NENLLIPFIL VTGAVSEEFA VTCLKHGIDD
YILKSNLSRL PSAILTALRQ RELERMKLQA MQELKEQNEQ ILKINKELDS FIYSISHSLR
GPLSTVSGLL HLAEKESQEK NDMSVKELHQ MMETCVKRLD TTLRQMVDQS KNARLEVDTD
AIDINALLDK AMKNVSYLPG SNEVEVTIIN TAQAPFYSDA YRLEVIFNSI LSNVIKYRDP
YKEKSVLLIQ VICTPEHAAM SFKDNGLGIP EKFMPNIFNM FYRASEKSDG AGLGLYMVKE
FVEKLKGSVT VTSVDNESTS VTIVLPNVRK DYSVDN