| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1525 |
|---|
| Symbol | |
|---|
| ID | 8252627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1808215 |
|---|
| End bp | 1809294 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644935179 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003091800 |
|---|
| Protein GI | 255531428 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.331233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.636632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAC CCAATGTAAG AGTTCTATAT ATTGATGATG AGGAAAACAA CTTGCAGGCT
TTTAAAGCAA GTTTTAGGCG GCAGTATGAA ATATATACAG CCATATCTGC TGCTGAAGGT
TTAAAGATAC TGGAAAATAT TTCGGTGCAG GTGATCCTGG CCGATCAGAA AATGCCGGGC
ACTACAGGTG TGGAATTTTT TAAGAGCATT ACAGATTCCT ATCCAGATCC GATAAGAATA
TTGTTGACAG GTTATACGGA TATTGAAGCG CTTGCAGATG CAATTAACCA TGGTGATATA
TATAGATATA TTACCAAACC CTGGAACGAC CTGGAACTGC ACAATTCCAT AAAAAATGCG
TATGATGCCT ATAAGTCTAA AATTGACCTG CGGAACAAAG TGGCCGAGCT GGAAAAGACA
AATGACGAAT TAAACAGGTT CATCTACAGT ATTTCCCATG AATTAAGAGC ACCATTGGTA
TCGGCAATGG GTATAGTAAA CCTGGTAAAG ATGGAAGGCC TTTATGAGTC GAGTGGTGAA
TACTGGAGTT TGATAGAAAC CTGTTCGAAC AAACTTGATT ATTATATCCA GAAAACCCTT
CAGTACTATA AAAATAATAA AACGGTTTCC GAACATAGCC TGATTGACTT TCATAAACTG
ATCCCCGGCC TTATCGATCT GTATTCTTAC GCTGATAAAG AAACTACTTT TAATACCGTA
ATAGATCAGA AAGTACCTTT TTACGGGGAT GCATTCAGGA TAGAAGTGAT ATTGGGTAAC
CTGATTTCGA ATGCCATAAA ATATCAGAAA GAAACAGAGT TAAATAAAAA GGTAAACATA
CATATAGCAG TAAGAAAAGA TCAGGTTGAA ATGTCTATTA ATGACAACGG AATGGGCATT
CTGAATGAGC ACCTGGAAAA GATATTCACC CAGTTCTTCA AAAGTAAAGT TAACCATGGT
AGCGGATTAG GCTTGTTTAT TGTTAAAGAA GCATTAAACA AGATTAATGG GAAAATAGCC
GTAAGCTCTG ATCCAGCTGA GGGTACTACC TTTAAAATAA CCATCCCCAA TGTTAAATAA
|
|---|
| Protein sequence | MSAPNVRVLY IDDEENNLQA FKASFRRQYE IYTAISAAEG LKILENISVQ VILADQKMPG
TTGVEFFKSI TDSYPDPIRI LLTGYTDIEA LADAINHGDI YRYITKPWND LELHNSIKNA
YDAYKSKIDL RNKVAELEKT NDELNRFIYS ISHELRAPLV SAMGIVNLVK MEGLYESSGE
YWSLIETCSN KLDYYIQKTL QYYKNNKTVS EHSLIDFHKL IPGLIDLYSY ADKETTFNTV
IDQKVPFYGD AFRIEVILGN LISNAIKYQK ETELNKKVNI HIAVRKDQVE MSINDNGMGI
LNEHLEKIFT QFFKSKVNHG SGLGLFIVKE ALNKINGKIA VSSDPAEGTT FKITIPNVK
|
|---|
| |