| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3029 |
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| Symbol | barA |
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| ID | 4184962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3470619 |
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| End bp | 3472004 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638073018 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_679612 |
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| Protein GI | 110639403 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.20083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCTTGA ACGAGGCATC GGATGCAATC TATTGGGTAA ATCATAAAGG CCTTATTACA
TACGCAAATC CAAGTGCACA AATACTTTTT GGTTATGAAG AAGTAGAGCT GAAAGATAAA
TCAATCAGTG ATCTGATTGT TTCTAAAACA GATCTCTTCA GTACGTTTTC AAGTAACATT
ATAGAAGAAA AAGGAGTTGT TATACAGCAG GAATTTGTGC GTAAAGACAA CTCAACTTTT
TATGGCGAAA TGAGTGTGCG GTTATTCGAT GATGGTTCGC ACCAGGCAAT TATACGCGAC
ATTACGAAGG GGGTTATTGA GCAGCGCCTG TTGCTTGACC GTGAAAGAAA ATTCAAAATA
TTAGTTGAAA ATGCATTTGA TATTATCATT GTATTAAGCT CAGACTTCAA AATAAAATTT
ATAAGCCCGG CCATAAAAAA GATGCTGGGG TATGAGATTG ATTCGGTGCT GGGAGAAAAT
TCCAATAAGT TTATTGAATT CAGAGATCGT GTAATGATTA AAGAAGTACT CAAAAACCAC
GGAATTACCT ACGCGATAAA TGATCTGAAG CTTATTCATA AAAATGGACA AATCATACAT
TGTGAAGTAA ACGCGGTAAA TTTTTTAAAT GATCCCCTGA TCAATGGCAT CATTGTTAAC
TGTCATGATA TCAGCAAGCG TATTCAGACA GAAAATGAAT TAATTAATAC AAACTATGAA
TTGGATAGTT TTGTATATAA GGTTTCCCAT GATTTAAAGG CTCCTTTGCG GTCCATGTTG
GGTTTAATTA ATTTATCCCA AAAGGAAAAT ACAGAAGATA CGGTAAAATT GTACTTGGAT
ATGATGGTCA GAAGTATTCA TAATATGGAT ATTTTTATAA AGGATCTTAC ACAATTTTCC
AGAAATAGCC GGATGGAGGT TATAAAAGAA TCTATTGACT TTAAGGAATT AATTACCAAA
ATTGAAAACA ACTTGAAATA TGACGACAAT GCCCGCTTTA TTTCATTTGA AAGAAATATC
AGCCAGCAAA GTTTATTTTA TTCTGATCCG AATAGAGTAG AAACTATTGT GAGTAATTTA
TTGTCAAATG CCTACAAGTA TCATAGGTTT GATAGTAATA ATCCTTATAT TAACGTTAAA
ATTGAGGTTT CTGAAACGGC GGCTTGTATT GTAATTAAAG ACAACGGTTC AGGAATTGCA
GATGAATATC ATAATAAAAT TTTTCAGATG TTTTTCAGGG CATCTGAGAA ATCACAAGGG
TCGGGCTTAG GCTTATATAT AGTTAAAAGT GCGATTGATA AACTTGAAGG TACAATAACA
TTACATTCAA TACCTGATAA AGAATCAACA TTTACAGTTG AAATACCAAA TTTGTTAACA
CGTTAA
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| Protein sequence | MLLNEASDAI YWVNHKGLIT YANPSAQILF GYEEVELKDK SISDLIVSKT DLFSTFSSNI
IEEKGVVIQQ EFVRKDNSTF YGEMSVRLFD DGSHQAIIRD ITKGVIEQRL LLDRERKFKI
LVENAFDIII VLSSDFKIKF ISPAIKKMLG YEIDSVLGEN SNKFIEFRDR VMIKEVLKNH
GITYAINDLK LIHKNGQIIH CEVNAVNFLN DPLINGIIVN CHDISKRIQT ENELINTNYE
LDSFVYKVSH DLKAPLRSML GLINLSQKEN TEDTVKLYLD MMVRSIHNMD IFIKDLTQFS
RNSRMEVIKE SIDFKELITK IENNLKYDDN ARFISFERNI SQQSLFYSDP NRVETIVSNL
LSNAYKYHRF DSNNPYINVK IEVSETAACI VIKDNGSGIA DEYHNKIFQM FFRASEKSQG
SGLGLYIVKS AIDKLEGTIT LHSIPDKEST FTVEIPNLLT R
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