Gene CHU_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3454 
SymbolkinG 
ID4186032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3997494 
End bp3998813 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content34% 
IMG OID638073442 
Producthistidine kinase 
Protein accessionYP_680031 
Protein GI110639821 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0351684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAGCAA CTTTCAAAGA TCCAAAAATA GAAGGATACA ATAAACGCAA ACGACTGCTG 
GACTACCTGA TCAAAGGTGC TTCAATCGTT GTATTTGTTG CAACCATTCC TGAAATATAT
TATTGGATCA CCGATACCTT AATTGTTGTT TCTGTAATTC TTGCACTCTT TGGTTTTTGT
TATTTTTTGA ATAAAAAAGG ACATACAAAT CTTGCTGCAA ACATCATTGT ACTTACTGTA
TCCATACTCG TGTTTTTTCA ATGTATGCTT ACGGGATTAT CCTCCATGGT ATTCTGTTTT
TACATGCCGT TGTTAATTGG TATTCCATTC ATCATTGATA ATAAAAACAT TGGTTTGATT
TTAATGCACA TGCTTATACC TATCATGCTG TGCGCCTATC TGCTGTTTAT TAATCAGGCA
AGTGCCCATG CAGCCAAAGA GCTGGCAACG GGTTTTACAA ATATAAACGG ACAGATTAAT
TTCCTTTGTG CGCTTTCACA ATGTGGATTT TTTGCCTGGT TCATCATCCG CGATCACTCA
TCTTCTCAGA AATTAATTCT GCTTTCCAAA GCAAATATTG AATACAAGAA TGCCAAGCTT
TTAAAAACAA ACAATGAAAT GGATCATTTG GTCTATAGCA TCAGTCATGA TTTGAGGGCG
CCGATTGCAT CTGCACTTGG TTTGATTGAA ATAAGTAAAC TGGAAACCGA TCCTGAAAAA
TTAAAATACT ACGAAATATT AAAAGAAGCC TGCTTACGAA GACTCGATAA TTTTATTTAT
GATATTTTAA ATTACCTGAA AAATAATCGC CTGGAAATTG AAGTCTGCAA TGTTTCTATA
AAAGAAGAAA TATTGAATTC CATTGAAATG AATTCCATAT ACAATGACCA GGTACATGTA
ACGATTGAAT GTGAATATGA GGGTGATTTT TATACAGATA AAAACCGCCT GCGCATGATT
TTAAATAATA TTATTTCGAA TGCCTTCAGG TATGCCAAGC CTTCAACAGT AGAAAAAACC
ATTCATATTA AAGTCCGCAA CAACTTCCCT ACCCTTGAAA TTGCTGTTAA AGACAATGGA
GTAGGGATCA ATAAAGAATA TATTGATAAA ATCTTTGAAA TGTTTTTTAA GACAGATGAA
AAAACCAAAG GGAGCGGACT GGGTTTATAT ATTACCAAAG AAGCACTAAC TAAAATTCAC
GGGTCTATCA CCGTATGGTC TGAAAAAGGC GTCGGTTCTA TCTTTACCAT TACCATACCA
AATCTTGAAA ATGTGCCTTT AGTCAGAGAA GACAATAATA TCAATTCCAT TATGGAATAA
 
Protein sequence
MEATFKDPKI EGYNKRKRLL DYLIKGASIV VFVATIPEIY YWITDTLIVV SVILALFGFC 
YFLNKKGHTN LAANIIVLTV SILVFFQCML TGLSSMVFCF YMPLLIGIPF IIDNKNIGLI
LMHMLIPIML CAYLLFINQA SAHAAKELAT GFTNINGQIN FLCALSQCGF FAWFIIRDHS
SSQKLILLSK ANIEYKNAKL LKTNNEMDHL VYSISHDLRA PIASALGLIE ISKLETDPEK
LKYYEILKEA CLRRLDNFIY DILNYLKNNR LEIEVCNVSI KEEILNSIEM NSIYNDQVHV
TIECEYEGDF YTDKNRLRMI LNNIISNAFR YAKPSTVEKT IHIKVRNNFP TLEIAVKDNG
VGINKEYIDK IFEMFFKTDE KTKGSGLGLY ITKEALTKIH GSITVWSEKG VGSIFTITIP
NLENVPLVRE DNNINSIME