| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2461 |
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| Symbol | |
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| ID | 7271630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2596387 |
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| End bp | 2598114 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643571060 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002467461 |
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| Protein GI | 219853029 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAG ACCGTGAGAA GTCACTGAAT CCAACACCCT CTGACACAAA CCGCCTCAGA
CAGCATGCCG AGGAGGCGTT AAAGACACAA CCGACCCTAT CGGACGCAGT ACTTTCGCAT
GAGAAAGCGA TCGCCCTGGT CCACGAACTG CAGGTCCATC AGATCGAACT GGAGATGCAG
AACGAAGAAC TGGCCCAGAC CCGGGAAGAG GCTGAAACTC TGCGGGACCA GTACATCGAT
CTCTATGACT TTGCGCCGGT TGGCTATGTC ACGCTCGATC CGGCCGGGAT CATCCAGGAG
GTGAACCTGA CCGGATCGCT GCTACTGTCA ATGAACCGGG GGGCCCTCAT CGGCGCACGG
TTCGGGGCGT TCCTCCACCT GGACTCCCGG CTCCCCTTCA CGGCGTTCTG CGAGCGGGTG
CGTCGCACCG GCATCACAGA GACCTGCGAC CTGAAAATGC AGGGGCCGGC CGGAGACCGG
GTCTGGTATG CCCATCTGGA TGGGAGGGTC AAGCAAGCGG GGCCGAACAG CGACGGTCGG
ATCCGGCTGG CCTTCAGCGA TGTCACCGAG AACAGAAGGG CGAACGAAGC AGCAGCCGAG
AGCGAACTGC GCTTCCGGCG ACTCTTCGAG ACAATGCTTC AGGGCGTGGT CTACCAGAAC
GCTGACGGCC GAATCATCTC CATGAACCCC GCAGCCGAGC GAATCCTCGG GAAGAGTCCG
GCCGAATTCA TCAACCAGAC CTCGGAGGAT ACCGAGCATC ACACGATCCG CGAGGACGGC
ACGAAGTTCC TGGGCCTGGA ACATCCGGCG ATGGTGGCCC TCAGAACCGG AGAGGATATC
AAGGATGTGG TGATGGGCGT GTTCAATCCC AGGGAGCAGG GCTACCGCTG GATCAGCATC
GACGCCGTCC CTCTCTTCCA TCCGAGCGAG AAGAGGCCCT ACCAGGTCTA CACAATCTTC
GACGACATCA CTGAGCGCAG AAAAGCCGAA GAGGTGCTCA GGGAGTATGG AGAGAAGGTG
CAGGCGAGCA ACGAGGAGCT CCAGCAATTC GCCTATGTCA CCTCGCACGA TCTGCAGGAG
CCACTCAGAA ACATCGTCAG TTTCAGCCAA CTCCTCAACC GACGATATCA GGGCCGGCTC
GACGCAGATG CGGATGAGTA TCTCGGGTTC ATCATCGAAG GCGGGCAGCG GATGCAGTTG
TTGATCAAGG ATCTGCTCCA GTTCTCTCAG GTCCAGACCA CGGCCAGACC CCTGGAACAG
GTGGACATGC ACGGGGTCGT TGCCGACGTT CTTCGGATGA TGGAGAGGCA GATCCGCGAA
GCGAACGCGA CCGTGACCAT GGGCGACCTC CCGGCGATCA TGGCTGACGC ATCCCAGCTC
GAGCAGGTCT TTACGAACCT CATAGGAAAC GCCCTGAAGT ACCGCCGGCA CGACCTGCCC
CCTGCGATCC AGATCTCAGC CGAGCGGATG AGGAAGTGCT GGCGTTTCGC TGTCGCGGAT
AATGGGATCG GGATCGCACC CGAGTTCTTC GATCGTATCT TTGTGGTCTT CCAGCGGCTC
CATACGATAG AGGAGTTCGA GGGCACGGGG ATCGGGCTCG CGATCGTCAA GAAGATCGTC
GAACGACACG GCGGACGTGT CAGCGTCACG TCGGTGCCTG GCGAGGGGAG CACGTTCTTC
TTCACCCTGC CGGCGGTGGA GATCCGCGCA CGGTCACGGA ATGTCTGA
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| Protein sequence | MKPDREKSLN PTPSDTNRLR QHAEEALKTQ PTLSDAVLSH EKAIALVHEL QVHQIELEMQ
NEELAQTREE AETLRDQYID LYDFAPVGYV TLDPAGIIQE VNLTGSLLLS MNRGALIGAR
FGAFLHLDSR LPFTAFCERV RRTGITETCD LKMQGPAGDR VWYAHLDGRV KQAGPNSDGR
IRLAFSDVTE NRRANEAAAE SELRFRRLFE TMLQGVVYQN ADGRIISMNP AAERILGKSP
AEFINQTSED TEHHTIREDG TKFLGLEHPA MVALRTGEDI KDVVMGVFNP REQGYRWISI
DAVPLFHPSE KRPYQVYTIF DDITERRKAE EVLREYGEKV QASNEELQQF AYVTSHDLQE
PLRNIVSFSQ LLNRRYQGRL DADADEYLGF IIEGGQRMQL LIKDLLQFSQ VQTTARPLEQ
VDMHGVVADV LRMMERQIRE ANATVTMGDL PAIMADASQL EQVFTNLIGN ALKYRRHDLP
PAIQISAERM RKCWRFAVAD NGIGIAPEFF DRIFVVFQRL HTIEEFEGTG IGLAIVKKIV
ERHGGRVSVT SVPGEGSTFF FTLPAVEIRA RSRNV
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