More than 300 homologs were found in PanDaTox collection
for query gene Bind_2484 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_2484  HAD family hydrolase  100 
 
 
233 aa  469  1.0000000000000001e-131  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6309  HAD family hydrolase  74.21 
 
 
224 aa  337  9.999999999999999e-92  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.403057 
 
 
-
 
NC_007509  Bcep18194_C7037  HAD family hydrolase  74.21 
 
 
224 aa  337  9.999999999999999e-92  Burkholderia sp. 383  Bacteria  normal  normal  0.927677 
 
 
-
 
NC_010512  Bcenmc03_6102  HAD family hydrolase  73.76 
 
 
224 aa  337  9.999999999999999e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.524869  normal 
 
 
-
 
NC_008060  Bcen_1317  HAD family hydrolase  73.3 
 
 
224 aa  335  2.9999999999999997e-91  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.716581  n/a   
 
 
-
 
NC_008544  Bcen2424_6512  HAD family hydrolase  73.3 
 
 
224 aa  335  2.9999999999999997e-91  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5583  HAD family hydrolase  73.3 
 
 
224 aa  335  5e-91  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4411  HAD family hydrolase  71.95 
 
 
224 aa  329  3e-89  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.981308  normal 
 
 
-
 
NC_009485  BBta_4275  putative haloacid dehalogenase-like hydrolase family protein  71.95 
 
 
224 aa  328  3e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0625662 
 
 
-
 
NC_010676  Bphyt_4503  HAD-superfamily hydrolase, subfamily IA, variant 3  71.95 
 
 
224 aa  327  1.0000000000000001e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0822  HAD family hydrolase  71.49 
 
 
224 aa  323  1e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.923988 
 
 
-
 
NC_010623  Bphy_5294  HAD family hydrolase  70.78 
 
 
224 aa  316  2e-85  Burkholderia phymatum STM815  Bacteria  normal  normal  0.08015 
 
 
-
 
NC_010581  Bind_0160  HAD family hydrolase  65.61 
 
 
224 aa  298  6e-80  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.300128  normal  0.21286 
 
 
-
 
NC_009484  Acry_0513  HAD family hydrolase  65.44 
 
 
225 aa  291  4e-78  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4249  HAD family hydrolase  64.98 
 
 
224 aa  290  2e-77  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3310  HAD family hydrolase  66.36 
 
 
232 aa  285  5e-76  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2149  HAD family hydrolase  67.87 
 
 
224 aa  276  1e-73  Methylobacterium extorquens PA1  Bacteria  normal  0.376936  normal 
 
 
-
 
NC_010725  Mpop_2109  HAD-superfamily hydrolase, subfamily IA, variant 3  67.42 
 
 
224 aa  277  1e-73  Methylobacterium populi BJ001  Bacteria  normal  normal  0.546495 
 
 
-
 
NC_011757  Mchl_2426  HAD-superfamily hydrolase, subfamily IA, variant 3  67.42 
 
 
224 aa  273  1.0000000000000001e-72  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0132517 
 
 
-
 
NC_007005  Psyr_0131  HAD family hydrolase  57.73 
 
 
224 aa  265  2.9999999999999995e-70  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0276  hydrolase, haloacid dehalogenase-like family  57.73 
 
 
327 aa  263  3e-69  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.731129  n/a   
 
 
-
 
NC_013595  Sros_5624  HAD family hydrolase  59.63 
 
 
228 aa  238  5.999999999999999e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.147818  normal  0.407625 
 
 
-
 
NC_009338  Mflv_4417  HAD family hydrolase  40.19 
 
 
232 aa  145  7.0000000000000006e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.155896  normal  0.156136 
 
 
-
 
NC_008726  Mvan_1937  HAD family hydrolase  38.97 
 
 
234 aa  137  1e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.67763  normal 
 
 
-
 
NC_009077  Mjls_2776  HAD family hydrolase  35.4 
 
 
240 aa  128  8.000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  0.223588  normal 
 
 
-
 
NC_008146  Mmcs_2746  HAD family hydrolase  35.4 
 
 
240 aa  128  8.000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.906764  n/a   
 
 
-
 
NC_008705  Mkms_2790  HAD family hydrolase  35.4 
 
 
240 aa  128  8.000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0220  HAD family hydrolase  38.89 
 
 
238 aa  123  3e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.208784 
 
 
-
 
NC_008541  Arth_3439  HAD family hydrolase  35.19 
 
 
233 aa  122  7e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4850  HAD-superfamily hydrolase, subfamily IA, variant 3  35.65 
 
 
229 aa  116  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0298674  normal 
 
 
-
 
NC_013235  Namu_1750  HAD-superfamily hydrolase, subfamily IA, variant 1  34.91 
 
 
237 aa  114  1.0000000000000001e-24  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00428028  normal  0.0347073 
 
 
-
 
NC_009664  Krad_0228  HAD-superfamily hydrolase, subfamily IA, variant 1  35.21 
 
 
220 aa  112  4.0000000000000004e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.424895  hitchhiker  0.00464716 
 
 
-
 
NC_011886  Achl_3218  HAD-superfamily hydrolase, subfamily IA, variant 3  32.87 
 
 
234 aa  108  1e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_1880  HAD family hydrolase  34.56 
 
 
230 aa  105  8e-22  Nocardioides sp. JS614  Bacteria  normal  0.615565  n/a   
 
 
-
 
NC_013757  Gobs_4680  HAD-superfamily hydrolase, subfamily IA, variant 1  32.08 
 
 
223 aa  103  3e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1516  HAD-superfamily hydrolase, subfamily IA, variant 1  35.32 
 
 
222 aa  99.8  3e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  0.122032  n/a   
 
 
-
 
NC_013757  Gobs_3959  HAD-superfamily hydrolase, subfamily IA, variant 3  34.1 
 
 
229 aa  98.2  9e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0174  HAD family hydrolase  34.29 
 
 
215 aa  97.4  2e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0647  HAD family hydrolase  31.92 
 
 
221 aa  92  7e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.496334  normal 
 
 
-
 
NC_010725  Mpop_4472  HAD-superfamily hydrolase, subfamily IA, variant 1  29.86 
 
 
223 aa  90.5  2e-17  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3991  HAD family hydrolase  31.63 
 
 
223 aa  89.7  3e-17  Methylobacterium extorquens PA1  Bacteria  normal  0.0589691  normal  0.286342 
 
 
-
 
NC_011894  Mnod_1284  HAD-superfamily hydrolase, subfamily IA, variant 3  31.42 
 
 
227 aa  87  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.153215  n/a   
 
 
-
 
NC_007964  Nham_3915  HAD family hydrolase  28.1 
 
 
238 aa  87.4  2e-16  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0537  HAD-superfamily hydrolase, subfamily IA, variant 1  29.68 
 
 
260 aa  85.9  5e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4360  HAD-superfamily hydrolase, subfamily IA, variant 1  30.7 
 
 
223 aa  84  0.000000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0853  HAD family hydrolase  30.49 
 
 
221 aa  77.4  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0114666 
 
 
-
 
NC_008639  Cpha266_2701  beta-phosphoglucomutase family hydrolase  31.02 
 
 
232 aa  77  0.0000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0243  HAD family hydrolase  31.1 
 
 
217 aa  76.3  0.0000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0033  HAD family hydrolase  28.51 
 
 
228 aa  75.5  0.0000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.144848  normal 
 
 
-
 
NC_009952  Dshi_0545  HAD-superfamily hydrolase  25.82 
 
 
246 aa  75.5  0.0000000000007  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  30 
 
 
235 aa  72  0.000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_009523  RoseRS_0332  HAD family hydrolase  31.9 
 
 
232 aa  72  0.000000000007  Roseiflexus sp. RS-1  Bacteria  normal  0.827004  normal  0.0405623 
 
 
-
 
NC_004116  SAG0181  HAD superfamily hydrolase  30.23 
 
 
214 aa  70.9  0.00000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_1461  HAD-superfamily hydrolase, subfamily IA, variant 3  27.84 
 
 
211 aa  70.1  0.00000000003  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_012791  Vapar_3792  HAD-superfamily hydrolase, subfamily IA, variant 3  28.81 
 
 
229 aa  69.7  0.00000000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_20950  haloacid dehalogenase superfamily enzyme, subfamily IA  30.41 
 
 
216 aa  70.1  0.00000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2205  HAD-superfamily hydrolase subfamily IA, variant 3  30.6 
 
 
228 aa  70.1  0.00000000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.322675  normal 
 
 
-
 
NC_010424  Daud_0525  HAD family hydrolase  29.95 
 
 
209 aa  70.1  0.00000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00124351  n/a   
 
 
-
 
NC_013165  Shel_14830  haloacid dehalogenase superfamily enzyme, subfamily IA  28.76 
 
 
219 aa  69.3  0.00000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.187107 
 
 
-
 
NC_008709  Ping_1410  phosphoglycolate phosphatase  26.91 
 
 
225 aa  68.9  0.00000000006  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2043  HAD-superfamily hydrolase, subfamily IA, variant 3  35.62 
 
 
208 aa  68.2  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2198  beta-phosphoglucomutase  25.68 
 
 
215 aa  68.2  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  normal  0.102511  n/a   
 
 
-
 
NC_013235  Namu_4663  HAD-superfamily hydrolase, subfamily IA, variant 3  32.43 
 
 
215 aa  67  0.0000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.828051  normal 
 
 
-
 
NC_007434  BURPS1710b_1218  putative hydrolase  31.58 
 
 
762 aa  67  0.0000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1388  putative phosphatase  30.48 
 
 
218 aa  67.4  0.0000000002  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00329661  n/a   
 
 
-
 
NC_011369  Rleg2_3445  HAD-superfamily hydrolase, subfamily IA, variant 3  29.63 
 
 
229 aa  67  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6944  phosphoglycolate phosphatase  30 
 
 
257 aa  66.6  0.0000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1021  beta-phosphoglucomutase  28.48 
 
 
209 aa  66.6  0.0000000003  Clostridium phytofermentans ISDg  Bacteria  normal  0.0660798  n/a   
 
 
-
 
NC_006348  BMA0717  HAD-superfamily hydrolase  31.55 
 
 
224 aa  66.2  0.0000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1609  HAD-superfamily hydrolase  31.55 
 
 
224 aa  66.2  0.0000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00430  beta-phosphoglucomutase  28.18 
 
 
216 aa  66.2  0.0000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1040  HAD family hydrolase  25.5 
 
 
226 aa  66.6  0.0000000004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00000171478  n/a   
 
 
-
 
NC_007778  RPB_0589  HAD family hydrolase  29.1 
 
 
217 aa  66.2  0.0000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3012  phosphoglycolate phosphatase  30.2 
 
 
237 aa  66.2  0.0000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0258131  normal  0.0275568 
 
 
-
 
NC_008785  BMASAVP1_A2296  HAD-superfamily hydrolase  31.55 
 
 
224 aa  66.2  0.0000000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2990  HAD-superfamily hydrolase  31.55 
 
 
224 aa  66.2  0.0000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1060  haloacid dehalogenase, IA family protein  31.55 
 
 
224 aa  66.2  0.0000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0811  HAD-superfamily hydrolase, subfamily IA, variant 3  26.32 
 
 
225 aa  65.9  0.0000000005  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.332678 
 
 
-
 
NC_012560  Avin_15750  phosphoglycolate phosphatase  27.35 
 
 
223 aa  65.9  0.0000000006  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  28.05 
 
 
456 aa  65.9  0.0000000006  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_012850  Rleg_3747  HAD-superfamily hydrolase, subfamily IA, variant 3  27.78 
 
 
229 aa  65.9  0.0000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.422409  normal 
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  25.89 
 
 
221 aa  65.1  0.0000000009  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2449  HAD family hydrolase  25.81 
 
 
217 aa  65.1  0.0000000009  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0190416  n/a   
 
 
-
 
NC_010003  Pmob_0141  beta-phosphoglucomutase  26.2 
 
 
214 aa  64.3  0.000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1268  HAD family hydrolase  33.55 
 
 
215 aa  64.7  0.000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1058  HAD-superfamily hydrolase, subfamily IA, variant 3  30.11 
 
 
217 aa  64.7  0.000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.918987  n/a   
 
 
-
 
NC_008340  Mlg_0909  phosphoglycolate phosphatase  27.75 
 
 
222 aa  64.7  0.000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1487  putative phosphatase  30.11 
 
 
224 aa  63.5  0.000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.751605  n/a   
 
 
-
 
NC_009832  Spro_3313  putative phosphatase  31.55 
 
 
218 aa  63.5  0.000000002  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00109043  normal 
 
 
-
 
NC_011365  Gdia_0245  HAD-superfamily hydrolase, subfamily IA, variant 3  35.47 
 
 
193 aa  64.3  0.000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.803486  normal 
 
 
-
 
NC_013162  Coch_0471  HAD-superfamily hydrolase, subfamily IA, variant 3  24.62 
 
 
210 aa  63.9  0.000000002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3540  HAD-superfamily hydrolase, subfamily IA, variant 3  33.71 
 
 
209 aa  64.3  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.983537  normal  0.491386 
 
 
-
 
NC_013730  Slin_0267  HAD-superfamily hydrolase, subfamily IA, variant 3  26.49 
 
 
220 aa  63.5  0.000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.583067  normal  0.103324 
 
 
-
 
NC_007951  Bxe_A0971  2-phosphoglycolate phosphatase  29.21 
 
 
237 aa  63.2  0.000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.080581  normal 
 
 
-
 
NC_010655  Amuc_1649  beta-phosphoglucomutase family hydrolase  31.36 
 
 
202 aa  63.5  0.000000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.382766 
 
 
-
 
NC_013525  Tter_0876  HAD-superfamily hydrolase, subfamily IA, variant 3  29.56 
 
 
215 aa  63.2  0.000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_3250  HAD-superfamily hydrolase, subfamily IA, variant 3  29.73 
 
 
223 aa  63.2  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.313411 
 
 
-
 
NC_009073  Pcal_1715  HAD family hydrolase  34.07 
 
 
195 aa  63.2  0.000000003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.101498 
 
 
-
 
NC_010524  Lcho_0956  phosphoglycolate phosphatase  28.77 
 
 
222 aa  63.2  0.000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010622  Bphy_0735  phosphoglycolate phosphatase  29.19 
 
 
237 aa  62.8  0.000000004  Burkholderia phymatum STM815  Bacteria  normal  0.442963  normal 
 
 
-
 
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