More than 300 homologs were found in PanDaTox collection
for query gene Mnod_1284 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_1284  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
227 aa  442  1e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.153215  n/a   
 
 
-
 
NC_011757  Mchl_4360  HAD-superfamily hydrolase, subfamily IA, variant 1  66.06 
 
 
223 aa  294  6e-79  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4472  HAD-superfamily hydrolase, subfamily IA, variant 1  64.68 
 
 
223 aa  293  1e-78  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3991  HAD family hydrolase  64.68 
 
 
223 aa  291  7e-78  Methylobacterium extorquens PA1  Bacteria  normal  0.0589691  normal  0.286342 
 
 
-
 
NC_010505  Mrad2831_0647  HAD family hydrolase  64.68 
 
 
221 aa  288  6e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.496334  normal 
 
 
-
 
NC_009675  Anae109_0220  HAD family hydrolase  56.94 
 
 
238 aa  240  1e-62  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.208784 
 
 
-
 
NC_008009  Acid345_0033  HAD family hydrolase  52.05 
 
 
228 aa  233  2.0000000000000002e-60  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.144848  normal 
 
 
-
 
NC_007964  Nham_3915  HAD family hydrolase  50.69 
 
 
238 aa  211  7e-54  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0537  HAD-superfamily hydrolase, subfamily IA, variant 1  41.15 
 
 
260 aa  166  2e-40  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1750  HAD-superfamily hydrolase, subfamily IA, variant 1  39.45 
 
 
237 aa  156  3e-37  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00428028  normal  0.0347073 
 
 
-
 
NC_013131  Caci_4850  HAD-superfamily hydrolase, subfamily IA, variant 3  41.1 
 
 
229 aa  142  3e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0298674  normal 
 
 
-
 
NC_009664  Krad_0228  HAD-superfamily hydrolase, subfamily IA, variant 1  37.44 
 
 
220 aa  141  8e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.424895  hitchhiker  0.00464716 
 
 
-
 
NC_008541  Arth_3439  HAD family hydrolase  38.28 
 
 
233 aa  135  7.000000000000001e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4680  HAD-superfamily hydrolase, subfamily IA, variant 1  36.92 
 
 
223 aa  132  3e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3218  HAD-superfamily hydrolase, subfamily IA, variant 3  36.67 
 
 
234 aa  128  6e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_1880  HAD family hydrolase  38.39 
 
 
230 aa  126  3e-28  Nocardioides sp. JS614  Bacteria  normal  0.615565  n/a   
 
 
-
 
NC_008025  Dgeo_0689  HAD family hydrolase  38.86 
 
 
229 aa  124  1e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.319596 
 
 
-
 
NC_009077  Mjls_2776  HAD family hydrolase  36.49 
 
 
240 aa  123  2e-27  Mycobacterium sp. JLS  Bacteria  normal  0.223588  normal 
 
 
-
 
NC_008146  Mmcs_2746  HAD family hydrolase  36.49 
 
 
240 aa  123  2e-27  Mycobacterium sp. MCS  Bacteria  normal  0.906764  n/a   
 
 
-
 
NC_008705  Mkms_2790  HAD family hydrolase  36.49 
 
 
240 aa  123  2e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4417  HAD family hydrolase  36.73 
 
 
232 aa  122  6e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.155896  normal  0.156136 
 
 
-
 
NC_008726  Mvan_1937  HAD family hydrolase  36.45 
 
 
234 aa  118  9e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.67763  normal 
 
 
-
 
NC_008148  Rxyl_0174  HAD family hydrolase  35.02 
 
 
215 aa  112  4.0000000000000004e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0513  HAD family hydrolase  37.33 
 
 
225 aa  111  8.000000000000001e-24  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1516  HAD-superfamily hydrolase, subfamily IA, variant 1  37.5 
 
 
222 aa  109  4.0000000000000004e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  0.122032  n/a   
 
 
-
 
NC_010557  BamMC406_6309  HAD family hydrolase  34.68 
 
 
224 aa  108  5e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.403057 
 
 
-
 
NC_010512  Bcenmc03_6102  HAD family hydrolase  34.36 
 
 
224 aa  108  6e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.524869  normal 
 
 
-
 
NC_008060  Bcen_1317  HAD family hydrolase  34.36 
 
 
224 aa  108  6e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.716581  n/a   
 
 
-
 
NC_008544  Bcen2424_6512  HAD family hydrolase  34.36 
 
 
224 aa  108  6e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7037  HAD family hydrolase  33.95 
 
 
224 aa  108  8.000000000000001e-23  Burkholderia sp. 383  Bacteria  normal  normal  0.927677 
 
 
-
 
NC_009620  Smed_4249  HAD family hydrolase  36.41 
 
 
224 aa  106  3e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0160  HAD family hydrolase  33.64 
 
 
224 aa  105  4e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.300128  normal  0.21286 
 
 
-
 
NC_008392  Bamb_5583  HAD family hydrolase  34.23 
 
 
224 aa  105  5e-22  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3959  HAD-superfamily hydrolase, subfamily IA, variant 3  36.28 
 
 
229 aa  103  2e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4503  HAD-superfamily hydrolase, subfamily IA, variant 3  33.64 
 
 
224 aa  103  2e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0822  HAD family hydrolase  33.02 
 
 
224 aa  102  4e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.923988 
 
 
-
 
NC_010623  Bphy_5294  HAD family hydrolase  32.88 
 
 
224 aa  102  6e-21  Burkholderia phymatum STM815  Bacteria  normal  normal  0.08015 
 
 
-
 
NC_009485  BBta_4275  putative haloacid dehalogenase-like hydrolase family protein  34.43 
 
 
224 aa  100  1e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0625662 
 
 
-
 
NC_009675  Anae109_3310  HAD family hydrolase  33.93 
 
 
232 aa  99.8  3e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4411  HAD family hydrolase  32.59 
 
 
224 aa  98.6  8e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.981308  normal 
 
 
-
 
NC_010001  Cphy_3114  HAD family hydrolase  29.63 
 
 
216 aa  97.4  2e-19  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5624  HAD family hydrolase  33.94 
 
 
228 aa  94.4  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.147818  normal  0.407625 
 
 
-
 
NC_008345  Sfri_1492  HAD family hydrolase  30.92 
 
 
217 aa  93.2  3e-18  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.210059  n/a   
 
 
-
 
NC_007954  Sden_2300  HAD family hydrolase  34.38 
 
 
215 aa  87.8  1e-16  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000000835779  n/a   
 
 
-
 
NC_010581  Bind_2484  HAD family hydrolase  31.42 
 
 
233 aa  87  2e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2449  HAD family hydrolase  31.94 
 
 
217 aa  85.9  5e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0190416  n/a   
 
 
-
 
NC_004578  PSPTO_0276  hydrolase, haloacid dehalogenase-like family  30.56 
 
 
327 aa  85.1  7e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.731129  n/a   
 
 
-
 
NC_008262  CPR_1944  pyrophosphatase PpaX  29.63 
 
 
214 aa  84.3  0.000000000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4626  HAD family hydrolase  29.21 
 
 
213 aa  83.6  0.000000000000003  Opitutus terrae PB90-1  Bacteria  normal  0.317625  normal 
 
 
-
 
NC_008709  Ping_2206  HAD family hydrolase  31.9 
 
 
227 aa  83.6  0.000000000000003  Psychromonas ingrahamii 37  Bacteria  normal  0.0834963  normal  0.088242 
 
 
-
 
NC_008261  CPF_2232  pyrophosphatase PpaX  29.17 
 
 
214 aa  82.8  0.000000000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0131  HAD family hydrolase  31.34 
 
 
224 aa  82.4  0.000000000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2473  HAD family hydrolase  33.76 
 
 
248 aa  82.4  0.000000000000005  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000591891  hitchhiker  0.00615598 
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  28.27 
 
 
456 aa  82.4  0.000000000000006  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0742  beta-phosphoglucomutase  27.19 
 
 
214 aa  80.9  0.00000000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007777  Francci3_0431  3-amino-5-hydroxybenoic acid synthesis related  36.15 
 
 
263 aa  81.3  0.00000000000001  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  28.12 
 
 
456 aa  80.5  0.00000000000002  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_008148  Rxyl_2310  HAD family hydrolase  32.61 
 
 
221 aa  80.5  0.00000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.523408  n/a   
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  28.27 
 
 
456 aa  80.5  0.00000000000002  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_010172  Mext_2149  HAD family hydrolase  32.72 
 
 
224 aa  79  0.00000000000005  Methylobacterium extorquens PA1  Bacteria  normal  0.376936  normal 
 
 
-
 
NC_008639  Cpha266_2701  beta-phosphoglucomutase family hydrolase  28.57 
 
 
232 aa  79  0.00000000000006  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2240  HAD family hydrolase  30.33 
 
 
214 aa  78.6  0.00000000000007  Marinomonas sp. MWYL1  Bacteria  normal  0.279618  normal  0.937061 
 
 
-
 
NC_009092  Shew_1595  HAD family hydrolase  32.08 
 
 
219 aa  78.6  0.00000000000008  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00389314  normal  0.0112895 
 
 
-
 
NC_008321  Shewmr4_2403  HAD family hydrolase  32.62 
 
 
248 aa  78.6  0.00000000000008  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000854479  normal 
 
 
-
 
NC_011059  Paes_0937  HAD-superfamily hydrolase, subfamily IA, variant 1  30.7 
 
 
219 aa  77.8  0.0000000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.171636 
 
 
-
 
NC_013946  Mrub_0251  HAD-superfamily hydrolase subfamily IA, variant 3  32.38 
 
 
216 aa  77.8  0.0000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.822561 
 
 
-
 
NC_011757  Mchl_2426  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
224 aa  77.8  0.0000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0132517 
 
 
-
 
NC_009921  Franean1_1661  AHBA synthesis associated protein  34.27 
 
 
214 aa  77.8  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.49792 
 
 
-
 
NC_008340  Mlg_0909  phosphoglycolate phosphatase  32.56 
 
 
222 aa  77.8  0.0000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008599  CFF8240_0391  phosphoglycolate phosphatase  27.05 
 
 
216 aa  77.8  0.0000000000001  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2632  HAD family hydrolase  30.77 
 
 
216 aa  77.8  0.0000000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.861911  hitchhiker  0.000131082 
 
 
-
 
NC_011662  Tmz1t_0925  phosphoglycolate phosphatase  36.17 
 
 
224 aa  77  0.0000000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1824  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  26.96 
 
 
213 aa  77  0.0000000000002  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0490965  n/a   
 
 
-
 
NC_010320  Teth514_1040  HAD family hydrolase  28.5 
 
 
226 aa  76.6  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00000171478  n/a   
 
 
-
 
NC_009675  Anae109_2037  HAD family hydrolase  30.43 
 
 
225 aa  76.3  0.0000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00546936 
 
 
-
 
NC_008942  Mlab_1212  hypothetical protein  31.46 
 
 
219 aa  76.6  0.0000000000003  Methanocorpusculum labreanum Z  Archaea  normal  0.0173059  normal  0.0170431 
 
 
-
 
NC_014212  Mesil_0482  HAD-superfamily hydrolase, subfamily IA, variant 3  31.9 
 
 
213 aa  75.9  0.0000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_2091  Beta-phosphoglucomutase hydrolase  28.11 
 
 
233 aa  76.3  0.0000000000004  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2060  HAD-superfamily hydrolase, subfamily IA, variant 3  31.28 
 
 
225 aa  76.3  0.0000000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.750609  n/a   
 
 
-
 
NC_008701  Pisl_0904  HAD family hydrolase  31.61 
 
 
197 aa  76.3  0.0000000000004  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_013411  GYMC61_1933  beta-phosphoglucomutase  31.94 
 
 
230 aa  75.9  0.0000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_1192  HAD-superfamily hydrolase, subfamily IA, variant 1  33.79 
 
 
232 aa  75.9  0.0000000000005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.998223  normal  0.137923 
 
 
-
 
NC_008577  Shewana3_2565  HAD family hydrolase  32.34 
 
 
244 aa  75.9  0.0000000000005  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00000244874  normal 
 
 
-
 
NC_010505  Mrad2831_3556  HAD family hydrolase  36.76 
 
 
262 aa  75.9  0.0000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A0192  beta-phosphoglucomutase  29.17 
 
 
220 aa  75.9  0.0000000000006  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.787129  normal 
 
 
-
 
NC_010725  Mpop_2109  HAD-superfamily hydrolase, subfamily IA, variant 3  32.39 
 
 
224 aa  75.5  0.0000000000006  Methylobacterium populi BJ001  Bacteria  normal  normal  0.546495 
 
 
-
 
NC_013512  Sdel_1899  HAD-superfamily hydrolase, subfamily IA, variant 3  30.46 
 
 
212 aa  75.5  0.0000000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000244384  n/a   
 
 
-
 
NC_012912  Dd1591_0072  HAD-superfamily hydrolase, subfamily IA, variant 3  31.65 
 
 
230 aa  75.5  0.0000000000006  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1313  HAD family hydrolase  33.33 
 
 
232 aa  75.1  0.0000000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.95229 
 
 
-
 
NC_003912  CJE1650  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  26.47 
 
 
213 aa  75.1  0.0000000000008  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2263  beta-phosphoglucomutase  34.04 
 
 
218 aa  75.1  0.0000000000008  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000132741  hitchhiker  0.000000451899 
 
 
-
 
NC_009715  CCV52592_0914  hypothetical protein  27.91 
 
 
216 aa  75.1  0.0000000000009  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1470  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  26.24 
 
 
213 aa  74.7  0.000000000001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  hitchhiker  0.000674726  n/a   
 
 
-
 
NC_009487  SaurJH9_0595  HAD family hydrolase  29.47 
 
 
215 aa  74.3  0.000000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0609  HAD family hydrolase  29.47 
 
 
215 aa  74.3  0.000000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_1427  HAD family hydrolase  33.33 
 
 
191 aa  74.7  0.000000000001  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.828576  normal 
 
 
-
 
NC_009953  Sare_1257  AHBA synthesis associated protein  31.6 
 
 
228 aa  74.7  0.000000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.0136935  hitchhiker  0.0000231922 
 
 
-
 
NC_009073  Pcal_1715  HAD family hydrolase  33.71 
 
 
195 aa  73.9  0.000000000002  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.101498 
 
 
-
 
NC_011898  Ccel_3242  beta-phosphoglucomutase  29.32 
 
 
219 aa  73.9  0.000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2007  HAD family hydrolase  29.35 
 
 
222 aa  73.2  0.000000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
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