Gene Anae109_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2037 
Symbol 
ID5375378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2307948 
End bp2308625 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID640843549 
ProductHAD family hydrolase 
Protein accessionYP_001379224 
Protein GI153004899 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00546936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCACTATG CTCCGGGTCT CTTGTCGGAA CGGCCTCCGA TCGCCATTCT CTTCGACCTC 
GACGGCACGC TCGTCGACAC GGTGCCCTTC ATCCTCGCCT CCGTGCGTCA TGCGTTCGCC
GGGTACGGGG ACTGTCCGAC GGACGCTCAG TGGATCGCGG GCATCGGCAC CCCGTTGCGG
GCGCAGATCG CCTCCTTCGC TCGTCACCCC GAGCACGTGG ACCCGCTCGT GGCCCGTTAC
CGGCAGTACT GGGTCGAGAA CCACGACCGC ATGACACGCC CCTTTCCTGG CGCCCTCGAG
GTGGTCGAGC TCCTCGTTAC CAGGGGGCAC CCGGTCGGCG TGGTGACGGC CAAGACCGAG
GAAGGTGCGC TGCGGACCCT CCGGCACACC GGGCTCCTGC GTTACATGCG AGCGATCGTG
GGCGCGGATA CGTGTCTCCG GAGCAAGCCG CACCCGGAGC CGGTGCACGT CGCGCTCGCG
CGGCTGGAGC GGCCCCCGCC GGAGGCCATC CTCGTCGGCG ACTCGCCGCA CGATATCGCG
GCTGCACGAG CCGCGGGGGT CCGGGCCATC GGGGTACTGC ACGGCGCGTG CGATCGCGAG
CGCCTCTTCG CGGCCGGCGC GGAGACGCTG CTCGAGGACC TCGGGCCGCT GCCTGCGCTC
GTCGCCGCGA CCGGTTAG
 
Protein sequence
MHYAPGLLSE RPPIAILFDL DGTLVDTVPF ILASVRHAFA GYGDCPTDAQ WIAGIGTPLR 
AQIASFARHP EHVDPLVARY RQYWVENHDR MTRPFPGALE VVELLVTRGH PVGVVTAKTE
EGALRTLRHT GLLRYMRAIV GADTCLRSKP HPEPVHVALA RLERPPPEAI LVGDSPHDIA
AARAAGVRAI GVLHGACDRE RLFAAGAETL LEDLGPLPAL VAATG