Gene Bcen2424_6512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6512 
Symbol 
ID4454665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp733321 
End bp733995 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID639698575 
ProductHAD family hydrolase 
Protein accessionYP_840135 
Protein GI116686888 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG AAACGTCATT TCTGTTCGAT CTCGACGGCA CGCTCGTCGA CAGCGTCTAT 
CAGCACGTAC TCGCGTGGAA GGAAGCGCTC GACGCCGAAG GCATCGAACT GTCGGTGTGG
CGCATCCATC GCAAGATCGG GATGAGCGGC GGCCTGTTCC TGAACCAGTT GCTGCGCGAA
ACGGCCGGCG ACATCGACGC CGAGCGCGTC GAGCGGCTCG CGCGGCTGCA TGCGGCCGCG
TACCAGCGGC TGCGCGCGCA GGTCCGGCCG CTGCCGGGCG CGCGCGAACT GCTGGCCGCG
CTGTCGAATG CCGGCATTCG CTGGGCGATC GCGACCAGCG GGCGGATGGA AACGGCGGCG
ATCAATCTGG AGGCGCTCGG CGTCGATCCG GCGAAGAACG TCGTCGTCAC GCGCGATCAG
GTGAAATATG CGAAGCCGGA CCCGGATTTG TTCCTGACTG CCGCCGCGAA GCTGAACGTG
CCGATCGAGC ATACGGTGGT GGTCGGCGAC AGCATCTGGG ACATGCTCGC CGCCGCCCGC
TGCCGCGCGC TCGGCGTCGG GCTGCTGGCG GGCGGGTACG GCAGCGACGA ACTGGAACGC
GCCGGCGCGC TGCGCGTGTA CGACGATCCG GCGGATCTGC TGTGGCACCT CGACGAGGTG
GCTGCGCGGC CGTAG
 
Protein sequence
MRIETSFLFD LDGTLVDSVY QHVLAWKEAL DAEGIELSVW RIHRKIGMSG GLFLNQLLRE 
TAGDIDAERV ERLARLHAAA YQRLRAQVRP LPGARELLAA LSNAGIRWAI ATSGRMETAA
INLEALGVDP AKNVVVTRDQ VKYAKPDPDL FLTAAAKLNV PIEHTVVVGD SIWDMLAAAR
CRALGVGLLA GGYGSDELER AGALRVYDDP ADLLWHLDEV AARP