Gene Mkms_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2790 
Symbol 
ID4615711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2909190 
End bp2909912 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID639792455 
ProductHAD family hydrolase 
Protein accessionYP_938774 
Protein GI119868822 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACT CGCACAGCAC GGCCGGTTCC GCACCGGCCG TGCTGTTCGA TATCGACGGC 
ACCCTGGTCG ACTCGAACTA TCTGCATGTC CACGCTTGGC ACCGGTCTTT CGCCGACGAG
GGGCTGACGG TTGAATCCTG GCGGGTGCAC CGGTGCATCG GCATGGACGG CTCGACGTTG
TTGGACAACC TGGTTCCCGA TGCCGACGAC GACACGCGAA AGCGTCTGAA GGACGGGCAT
TCTCGCTACT ACCTCGACGA CAGGGGCCTG TTACGCCTGC TTCCCGGTGC GCGGGCACTC
CTCGAGCGGA TCAAGGAGCT CGGCCTACAG GTGGTGCTGG CCACCTCGGC GCCCGAGGAC
GAACTCGACG TGCTCCGTGA GGTGCTCGAC AGTGAAGACG TCTACTCCGC CATGACGTCC
GGGGAGGACG TCGACACCGC CAAACCCCAG CCCGACATCG TCCACATCGC TCTGGAACGC
GCGGGTGTGG ACGCCGAGCA CGCGGTGTTC GTCGGCGACG CCGTATGGGA CATCGAGGCC
TGTCGGCGAG CCGGCCTGAC ATCCATCGGC GTGCTCAGCG GTGGCGTCTC CCGCGGCGAG
CTCACCGAGG CGGGTGCCCG CGCGGTCTTC GAGAACGCCG AAGACCTGCG CGTGCACATC
GACGAGAGCC CCGTCGCCGC GCTGCTGAGC CGTGCCGACA CGAACAGTCA GGCCAAGGCG
TAA
 
Protein sequence
MTNSHSTAGS APAVLFDIDG TLVDSNYLHV HAWHRSFADE GLTVESWRVH RCIGMDGSTL 
LDNLVPDADD DTRKRLKDGH SRYYLDDRGL LRLLPGARAL LERIKELGLQ VVLATSAPED
ELDVLREVLD SEDVYSAMTS GEDVDTAKPQ PDIVHIALER AGVDAEHAVF VGDAVWDIEA
CRRAGLTSIG VLSGGVSRGE LTEAGARAVF ENAEDLRVHI DESPVAALLS RADTNSQAKA