Gene Mnod_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1284 
Symbol 
ID7308035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1359098 
End bp1359781 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID643599026 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002496588 
Protein GI220921287 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.153215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCG CGGTGATCTT CGATATCGAC GGGACGCTCC TCGACAGCGT CGACGCGCAT 
GCGCAGGCCT GGGCGCGCAG CTTCGCGGCC TTCGGGATCA CGGTCCCGGA ACGGGAGATC
CGTGGCCAGA TCGGCAAGGG CGGCGATCAG CTGCTTCCGG TCTTCCTGGC GCCCGAGCGG
CTCGCGCGCG ACGGCGAAGC CATCGATTGT TACCGGGCAG ACCTCTACCG GCGGGAATAC
CTGCCGCGGA TCAGGCCGTT CCCGGGCGTG CGGGCCCTGT TCGAGCGCCT GCGCGCCGAG
GGCCACCGCC TCGCCCTCGC TTCCTCGGGC AAGGCCGATG AGGTGGCGCG CTACGAGGAG
ATTGCCGGCA TCGCCGACCT CGTCGACACC GCGACCAACT CGGACGAGGC GGAGCGCTCG
AAGCCTGCGC CCGACATCAT CGAGGCCGCG CTCGCCAAGC TCGGCCGTCC CGCATCCGGC
AGGGCCGTGA TGATCGGCGA TTCGCCCTAC GATGCCGAAT CCGCCGGGCG GGCCGGCCTC
CCGACCATCG GTCTCCTGTG CGGCGGATTT CCGGAGGCGG ATCTCGCAGC GGCCGGCTGC
ATCGCGATCT ACCGCGACCC GCAGGACCTC CTCGACGGGT ACGACCGGTC GCCCTTGCGG
CTCCGGGCGG CGCGCGGCGC CTGA
 
Protein sequence
MIRAVIFDID GTLLDSVDAH AQAWARSFAA FGITVPEREI RGQIGKGGDQ LLPVFLAPER 
LARDGEAIDC YRADLYRREY LPRIRPFPGV RALFERLRAE GHRLALASSG KADEVARYEE
IAGIADLVDT ATNSDEAERS KPAPDIIEAA LAKLGRPASG RAVMIGDSPY DAESAGRAGL
PTIGLLCGGF PEADLAAAGC IAIYRDPQDL LDGYDRSPLR LRAARGA