| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4850 |
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| Symbol | |
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| ID | 8336204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5518089 |
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| End bp | 5518778 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957950 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003115552 |
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| Protein GI | 256393988 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0298674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCTT CGAAGACTGA CACCGCCGCG CTCCTCGACC TCGACGGCAC GCTCGTCGAC
ACCAACTACC AGCACGCTAT CGCCTGGTTC CGGGCGTTCC GCGACCACGG CATCGTGCTG
CCGATCTGGC GTCTGCACCG GCACATCGGC ATGGGCGGGG AGCAGCTCGT CGCGGCCGTG
GCGGGGGAGC AGACCGAGCG CGAGCTCGGC GAGCAGGTAC GCCGCGACCA CAGCCGCCAC
TTCCACGAGC TCATCGGCGA GGTCGAGCTG ATGCCGGACG CGCGCCGCCT GATCCAGGAG
CTGCACGGCC GGGGCACACC AGTGGTCCTG GCCAGCTCCG CCGGCGAGAA GGACTTGAAG
TACTTCCGCT CGATGCTGGA CGTGGACGAC CTGCTGGCCG GGGCGACCTC GAGCAGCGAC
GTCGAGGCCG CCAAACCCGA ACCGGACATC ATCTGCGCGG CGCTCGAGAA GGTCCCGGAC
GCCGGACGGG CGGTGATGAT CGGCGACTCG ACCTGGGACT GCGAGGCCGC GCGCCGCGCC
GGCGTCGCGT CGGTGGCACT GCTGACCGGC GGATTCTCCG AGCAGGAGCT GCGAGACGCC
GGCGCCGAGG CGGTGTTCGC CTCCATCGGC GACCTGCTCG ACGGCCTCGA CCAGACGCCG
CTGGCTGAGG CCGCGCCAGC ACGCGAATGA
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| Protein sequence | MTSSKTDTAA LLDLDGTLVD TNYQHAIAWF RAFRDHGIVL PIWRLHRHIG MGGEQLVAAV
AGEQTERELG EQVRRDHSRH FHELIGEVEL MPDARRLIQE LHGRGTPVVL ASSAGEKDLK
YFRSMLDVDD LLAGATSSSD VEAAKPEPDI ICAALEKVPD AGRAVMIGDS TWDCEAARRA
GVASVALLTG GFSEQELRDA GAEAVFASIG DLLDGLDQTP LAEAAPARE
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