Gene Mflv_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4417 
Symbol 
ID4975730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4696324 
End bp4697022 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID640458645 
ProductHAD family hydrolase 
Protein accessionYP_001135674 
Protein GI145224996 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.155896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.156136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACTC AGAGCGTCTC TCCGGCAGTT CTGTTCGACA TCGACGGGAC TCTGGTCGAC 
TCCAATTACC TGCACGTCCA CGCGTGGATG CGAGCGTTCG ACGACGAGAA CCTGCCCGTG
TCCGCCTGGC GCATCCACCG GTGCATCGGG ATGGACGGCA CGACGTTGGT ACGGACCCTG
TCCGGTGATG CCGGTCAGGG CGTCCTCGAC CGGCTCAAGG ACGCGCACAG CAGGTACTAC
AAGGAGAACT CCTCGCTGCT GGCGCCGCTG CCCGGGGCCA GGGATCTGCT GCGTCGCGTG
GCGGCGACCG GACTGCAGGT GGTGCTGGCC ACCTCGGCGC CTGACGACGA ATTGACCTTG
CTGCGTGAGG TTCTCGACTG CGACGACGTG GTCGCCGCGG TCACGTCGTC GGCCGACGTG
GACACCGCCA AACCGAAGCC CGACATCGTG CAGGTCGCAC TGGACCGTGC CGGTGTCGGC
GCGCAGGACG CGGTGTTCGT CGGCGATGCG GTGTGGGATT GTGAGGCCGC CGGGCGGGCC
GGGGTCACCT CGATCGGACT GCTGAGCGGC GGTGTGTCTC GCGGGGAACT GCGGGAGGCA
GGCGCCGCGG GCGTGTTCGA GGACGCCGGC GACCTGTTGG CGAAGCTGGA CTCGACGGTC
ATCGGGGATC TGGCCGCTCG GGTCAGCGAC CCGCGGTAG
 
Protein sequence
MSTQSVSPAV LFDIDGTLVD SNYLHVHAWM RAFDDENLPV SAWRIHRCIG MDGTTLVRTL 
SGDAGQGVLD RLKDAHSRYY KENSSLLAPL PGARDLLRRV AATGLQVVLA TSAPDDELTL
LREVLDCDDV VAAVTSSADV DTAKPKPDIV QVALDRAGVG AQDAVFVGDA VWDCEAAGRA
GVTSIGLLSG GVSRGELREA GAAGVFEDAG DLLAKLDSTV IGDLAARVSD PR