Gene Anae109_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0220 
Symbol 
ID5377237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp251903 
End bp252619 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content77% 
IMG OID640841732 
ProductHAD family hydrolase 
Protein accessionYP_001377422 
Protein GI153003097 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.208784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCG TGCCGCATGG GCGAGCAGCG CCCACCTTGC AGGACATGGC GCGGCCTGAG 
GCGGTCCTCC TCGACGTGGA CGGGACGATG GTGGACTCGG TGGACCTCCA CGCGCGCGCG
TGGCAGGAGG CGCTCCGGAG GTTCGGCCGG GACGTCCCGC TCCCGGAGGT GCGGCGGCAG
ATCGGCAAGG GCGGCGACCA GCTCGTGCCG GTGTTCCTCC CTCCCGAGCA GCTCGCCCGG
GAGGGGGAGG CGCTCGAGCG GTTCCGCGCC GAGCTGTGGC GGCGCGAGTA CATGGCGCAG
GTGCGGCCGT TCCCGGGGGC GCGCGCGCTC CTGCGCCGCG CGCGAGAGGC GGGGCTGCGA
GTGGCGCTCG CGTCGAGCGG CAGCGAGGAG GAGGTCGCGC ACAACCGGCG GCTCCTCGAC
GTCGACGCGC TGCTCGAGGG GTCCACCACC TCCGACGACG CGGCGCGCTC GAAGCCGCAC
CCGGACATCT TCGAGGCGGC GCTCGCGCGC GTTCGCGCGC CGCCCGAGCG GGCGATCGCG
GTGGGCGACT CGCCCTGGGA CGCCCTCGCC GCGGGGCGCG CGGGCGTGAG GACCGTCGGG
CTCCTCTCCG GAGGGTTCGA GGAGCGCGAG CTGCGGGAGG CGGGCTGCGT GGCGATCTAC
GCCGGGCCCG CCGACCTGCT CGCGCGCTTC GACGAGTCGC CGCTCGCGCG CGGCTGA
 
Protein sequence
MQRVPHGRAA PTLQDMARPE AVLLDVDGTM VDSVDLHARA WQEALRRFGR DVPLPEVRRQ 
IGKGGDQLVP VFLPPEQLAR EGEALERFRA ELWRREYMAQ VRPFPGARAL LRRAREAGLR
VALASSGSEE EVAHNRRLLD VDALLEGSTT SDDAARSKPH PDIFEAALAR VRAPPERAIA
VGDSPWDALA AGRAGVRTVG LLSGGFEERE LREAGCVAIY AGPADLLARF DESPLARG