| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4249 |
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| Symbol | |
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| ID | 5318462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 736272 |
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| End bp | 736946 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776054 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001312987 |
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| Protein GI | 150376391 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTG AACCCGTCTT TCTGTTCGAT CTGGACGGCA CACTCGTCGA CAGCGTCTAC
CAGCACGTGC TTGCCTGGAA AGAGGCCTTG GACGCCGAAG GGATCGACCT CTCGGTTTGG
CGCATTCATC GTAAGATCGG CATGAGCGGC GGGCTCTTCG CCGACCAGCT CCTGCGAGAA
ACGAATATGG AAATCAGCGC GGAACGGGTA GGTCGCTTGC GTCAGTACCA CGCCGCCGCC
TACAAGCGGC AAGCCGACAG CATCCGGCCG CTGCCAGGCG CGCGTGAACT CCTGACATGG
CTTACCGATG CGAAGATCTC CTATGCGATC GCCACGAGCG GGCGGATGGA GACGGCGGCC
GTCAATCTGG CCGCGCTTGG TATCGATCCG GCGGTCGTGC CGGTCGTCAC CCGGGATCTG
GTCAAATATG CCAAGCCTGA TCCGGACCTC TTTCTCGCTG CCGCCGAGCA ACTCGGCGCA
CCGATCGAGA CGGCGGTCGT CGTCGGGGAC AGTATCTGGG ACATGCTGGC TGCGGTACGC
TGCCGCGCCC TGGCCATCGG GTTGCTGAGC GGAGGCTACG GACATGAGGA ATTGCGGCAC
GCCGGCGCCT ACCGCATTTT CGAAGACCCG GCCGACATGC TGCATCACAT AGACGAGGTT
GGCGGGCGGA GGTGA
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| Protein sequence | MRIEPVFLFD LDGTLVDSVY QHVLAWKEAL DAEGIDLSVW RIHRKIGMSG GLFADQLLRE
TNMEISAERV GRLRQYHAAA YKRQADSIRP LPGARELLTW LTDAKISYAI ATSGRMETAA
VNLAALGIDP AVVPVVTRDL VKYAKPDPDL FLAAAEQLGA PIETAVVVGD SIWDMLAAVR
CRALAIGLLS GGYGHEELRH AGAYRIFEDP ADMLHHIDEV GGRR
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