Gene Mchl_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2426 
Symbol 
ID7113782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2564804 
End bp2565478 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID643525174 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002421197 
Protein GI218530381 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0132517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG AAACTGTCTT CCTGTTCGAT CTCGACGGCA CGCTGGTCGA CAGCGTCTAC 
CAGCACGTGC TCGCCTGGAA GGAGGCGCTC GACGCGGAGG GGATTCCGCT CTCTGTCTGG
CGCATCCACC GCAAGATCGG GATGAGCGGG GGCCTGTTCA CCAACCAGCT CCTGCGCGAG
ACGGGGCTCG CCATCGACCC GGAGCGGATC GACCGGCTGC GACGGCTGCA CGCGGAGGCT
TATGGCCGGC TCTCGAAGGG CGTGGTGCCG CTGCCGGGCG CCAGGGAACT GCTCGCCACG
CTGACCGAGA ACCGCATCCC TTGGGCCATC GCCACCAGCG GCCGGATGGA GACCGCCGGC
CACAACCTCG TGGCGCTCGG CGTCGATCCC GAACAGGTGC CTGTGGTGAC CCGTGACCTC
GTGAAATACG CCAAGCCCGA TCCGGACCTG TTCCTCGCCG CCGCCGCGCG GCTGAACGCA
TCAATCGAGC ACGCGGTGAT CGTCGGCGAT TCGATCTGGG ACATGTTGGC GGCCCGGCGC
TGCCGTGGGC TCGGGGTCGG CCTGCTCTCG GGTGGATACG GCACGGAAGA GCTGGAACGC
TCCGGCGCGG TCAGGGTCTA CGACGACCCC GCGATGCTTC TGGAACACCT CGACGAAGTC
GGCGGCCGAC GCTGA
 
Protein sequence
MRIETVFLFD LDGTLVDSVY QHVLAWKEAL DAEGIPLSVW RIHRKIGMSG GLFTNQLLRE 
TGLAIDPERI DRLRRLHAEA YGRLSKGVVP LPGARELLAT LTENRIPWAI ATSGRMETAG
HNLVALGVDP EQVPVVTRDL VKYAKPDPDL FLAAAARLNA SIEHAVIVGD SIWDMLAARR
CRGLGVGLLS GGYGTEELER SGAVRVYDDP AMLLEHLDEV GGRR