| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1880 |
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| Symbol | |
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| ID | 4596381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2002630 |
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| End bp | 2003322 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639776478 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_923077 |
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| Protein GI | 119716112 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.615565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCGGGC ACCGACGGCG CATGGCCTCC TTCGACACCG TCGTCCTCGA CATCGACGGC
ACGCTGCTCG ACTCCAACTA CCACCACGCC CTGGCCTGGT CGCGCGCCTT CGACAAGGTC
CTGGACCGGC ACGTCCCGGC CGCTGTGATC CACCGCCACA TCGGGATGGG CGGGGACCGG
CTGGTCGCCG CCGTCGCCGG CGACGACGTC GAGGACCAGC ACGGCGACGA GGTGCGCGAG
CGCTGGGAGA AGGAGTACGA CGAGGTCATC GACCAGACCC GGCTCTTCGA GTCGGCCCGC
GAGCTGCTCG TCGCGATCGG TGCGGCCGGC CTGAAGGTGG TGCTGGCCAG CTCCAGCATC
CCCAAGCACG CCGAGCGCCC CCTGGAGCTG CTGCGAGCCG GCGAGCACTC CGACGCCTGG
ACCACCAGCG AGGACGCCGA GGAGTCCAAG CCCGACCCGG AGCTGCTCGA CGCGGCGCTG
GAGAAGGTCG CCGGAGGCCG CGCGCTGATG GTCGGCGACG CCGTCTGGGA CGTCGAGGCC
GCCGACGCCC AGAGGATCCC GACGATCGGA CTGCTCTGTG GCGGCACCGG ACGCCAGGAG
CTGCTCGACG CGGGCGCGGT CGCCGTGTAC GACGACCCGG CCGACCTGAT CGCGCACCTC
GGCGAGGCGC TCGAGGCCGC CAACAGGAGC TGA
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| Protein sequence | MTGHRRRMAS FDTVVLDIDG TLLDSNYHHA LAWSRAFDKV LDRHVPAAVI HRHIGMGGDR
LVAAVAGDDV EDQHGDEVRE RWEKEYDEVI DQTRLFESAR ELLVAIGAAG LKVVLASSSI
PKHAERPLEL LRAGEHSDAW TTSEDAEESK PDPELLDAAL EKVAGGRALM VGDAVWDVEA
ADAQRIPTIG LLCGGTGRQE LLDAGAVAVY DDPADLIAHL GEALEAANRS
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