Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0228 |
Symbol | |
ID | 5335957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 2088073 |
End bp | 2088735 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_001359983 |
Protein GI | 152964199 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.424895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00464716 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGACA CCGCGATCTT CGACGTCGAC GGCACCCTCG TCGACACCAA CTACCAGCAC GCCCTGGCCT GGTTCCGGGC CTTCCGCCGC TTCGGCATCA CCCTGCCGCT GTGGCGCCTG CACCGCGGGA TCGGCATGGG TGGGGACGTC TTCGTCCCCA CCGTCGGGGG GCAGGACGTG GAGGAGGCCC ACGGCGACGA CCTGCGCACG GCGTGGACGG AGGAGTTCGA CCGGCTCATC GGCGAGGTCC AGCCCCTGGA GGGCGCGCAC GAGCTGCTGC GGGCGGTGAA GGACCGCGGC TTCCGCCTCG TCCTGGCCAG CTCCGGGTCG GGCAAGCACG TCGACGTCTT CCTCGACCTC GTCGACGGGA AGGGGCTCGC CGACGCCTGG ACGACGTCCG AGGACGCCGA GACGAGCAAA CCCGCCCCGG ACCTGGTGGC GGTGGCGCTG GAGAAGGTGG GCGGCACCTC GGGGGTGATG GTGGGCGACT CCGTCTACGA CGTCGAGTCC GCCGGGAAGC TCGACGTGCC GACGCTGGCC CTGCGCACGG GCGGGTTCGG CGTCGAGGAG CTGCGCGCGG CCGGGGCGGT GGGCGTCTTC GACTCCCTCG TCGACCTGCG CGAGCACCTC GACGAGACCC CGCTGGCCCG CCCCGGGTCC TGA
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Protein sequence | MADTAIFDVD GTLVDTNYQH ALAWFRAFRR FGITLPLWRL HRGIGMGGDV FVPTVGGQDV EEAHGDDLRT AWTEEFDRLI GEVQPLEGAH ELLRAVKDRG FRLVLASSGS GKHVDVFLDL VDGKGLADAW TTSEDAETSK PAPDLVAVAL EKVGGTSGVM VGDSVYDVES AGKLDVPTLA LRTGGFGVEE LRAAGAVGVF DSLVDLREHL DETPLARPGS
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