Gene Anae109_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3310 
Symbol 
ID5374371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3865299 
End bp3865997 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID640844823 
ProductHAD family hydrolase 
Protein accessionYP_001380479 
Protein GI153006154 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG GAAGAACGAT GGCCCCCGAG CCGCAAGCAT CGTTCGTGTT CGACCTCGAC 
GGCACGCTCG TCGATAGCGT CTATCAGCAC GTCCTCGCCT GGCGCGAGGC GCTCGACGCC
GAGGGCATCG AGTTGTCGGT TTGGCGGATC CATCGCCGCG TCGGAATGAG CGGGGGCCTC
TTCGCAAACA GACTCCTGCG CGAGACGGGC ACGGTGCTGT CGCCGGAGCG CGTCGAGGTG
CTGCAGCGAT TGCACGCCGA GGCGTTCCGG AGGCGTATCG CGGAGGTGCG GCCCTTGCCG
GGCGCGCGCG CGCTGCTCGC AGCGCTCACG GACGCCGGGA TCCCATGGGC GATCGCGACG
AGCGGACGGA TGGAGTCGGC CGAGCCGGTG CTCGCGACGC TCGAGATCGA TCTGCAACGG
GTGCCCGTCA TCACGCGGGA TCAGGTCAGG CACGCGAAGC CCGACCCCGA CCTCTTCCTG
GCGGCTGCTC GGCGGTTGGG AGTGGCGATC GAGTCGGCGT CGGTCGTGGG CGACTCGGTG
TGGGACATGC TCGCCGCCCG GCGAGCGCGC GCGCTCGGGA TCGGTCTGCT GTCCGGCGGG
TACGGTCAGG AAGAGCTGGA GCGTGCCGGC GCGTACCGCG TCTTCGGGGA TCCGGCGGAT
CTGCTCGAGC ACCTCGACGA GGTGGGTGTC CGCCGGTGA
 
Protein sequence
MPDGRTMAPE PQASFVFDLD GTLVDSVYQH VLAWREALDA EGIELSVWRI HRRVGMSGGL 
FANRLLRETG TVLSPERVEV LQRLHAEAFR RRIAEVRPLP GARALLAALT DAGIPWAIAT
SGRMESAEPV LATLEIDLQR VPVITRDQVR HAKPDPDLFL AAARRLGVAI ESASVVGDSV
WDMLAARRAR ALGIGLLSGG YGQEELERAG AYRVFGDPAD LLEHLDEVGV RR