| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2484 |
|---|
| Symbol | |
|---|
| ID | 6199638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 2836807 |
|---|
| End bp | 2837508 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641706466 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001833581 |
|---|
| Protein GI | 182679435 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACG ATCTTCCAGC CGACGACGGC TTTCGGACGG CCTTCCTTTT CGATCTCGAC
GGCACGCTGG TCGACAGCGT GTACCAACAC GTCCTGGCGT GGAAGACCGC GCTCGAGGCA
GAACAGATCC CTCTTTCGGT CTGGCGAATT CATCGCCGGA TCGGGATGAG CGGCGGCCTG
TTCATGGATC AACTCCTCCG CGAGGTCAAA CGCGACCTCG GCCCGGATGC CGTCGAACGG
CTTCAGGCGG CTCATGCCGC CGCCTATCAC GATCTGGGGG CGAGCGTTCG CCCACTTCCC
GGTGCTCGGG AGATCATCGC GGCGCTTGAC GAGCTTGGTG TGCGCTGGGC AATCGCGACG
AGCGGCCGGC TCGAAACCGC CTCGATCAAT CTGGCGACGC TGGGTGTGGA TCCCAAAAGC
GCGATCGTCG TTACACGCGA CCAGGTGCGT TACGCCAAGC CCGATCCAGA TCTCTTCGTA
GAAGCGGCTC GCCGGCTTCA GATTCCCATT CAGCAAACGA TCGTCGTCGG CTACAGCGTG
TGGGACATGC TGGCCGCAAC CCGCTGCCGG GCGCTGGGCG TCGGCTTCCT CTCCGGCGGC
TATGGCAGCG AGGAGCTTGA GCGCGCTGGC GCGCTGCGGG TCTACGATGA CCCGGCCGAT
CTGCTCTTCC ATTTGGACGA AATCTGTTCG CGCCATAGGT GA
|
|---|
| Protein sequence | MMNDLPADDG FRTAFLFDLD GTLVDSVYQH VLAWKTALEA EQIPLSVWRI HRRIGMSGGL
FMDQLLREVK RDLGPDAVER LQAAHAAAYH DLGASVRPLP GAREIIAALD ELGVRWAIAT
SGRLETASIN LATLGVDPKS AIVVTRDQVR YAKPDPDLFV EAARRLQIPI QQTIVVGYSV
WDMLAATRCR ALGVGFLSGG YGSEELERAG ALRVYDDPAD LLFHLDEICS RHR
|
|---|
| |