| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2776 |
|---|
| Symbol | |
|---|
| ID | 4878490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2883617 |
|---|
| End bp | 2884339 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640140071 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001071047 |
|---|
| Protein GI | 126435356 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.223588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACT CGCACAGCAC GGCCGGTTCC GCACCGGCCG TGCTGTTCGA TATCGACGGC
ACCCTGGTCG ACTCGAACTA TCTGCATGTC CACGCTTGGC ACCGGTCTTT CGCCGACGAG
GGGCTGACGG TTGAATCCTG GCGGGTGCAC CGGTGCATCG GCATGGACGG CTCGACGTTG
TTGGACAACC TGGTTCCCGA TGCCGACGAC GACACGCGAA AGCGTCTGAA GGACGGGCAT
TCTCGCTACT ACCTCGACGA CAGGGGCCTG TTACGCCTGC TTCCCGGTGC GCGGGCACTC
CTCGAGCGGA TCAAGGAGCT CGGCCTACAG GTGGTGCTGG CCACCTCGGC GCCCGAGGAC
GAACTCGACG TGCTCCGTGA GGTGCTCGAC AGTGAAGACG TCTACTCCGC CATGACGTCC
GGGGAGGACG TCGACACCGC CAAACCCCAG CCCGACATCG TCCACATCGC TCTGGAACGC
GCGGGTGTGG ACGCCGAGCA CGCGGTGTTC GTCGGCGACG CCGTGTGGGA CATCGAGGCC
TGTCGGCGAG CCGGCCTGAC ATCCATCGGC GTGCTCAGCG GTGGCGTCTC CCGCGGCGAG
CTCACCGAGG CGGGTGCCCG CGCGGTCTTC GAGAACGCCG AAGACCTGCG CGTGCACATC
GACGAGAGCC CCGTCGCCGC GCTGCTGAGC CGTGCCGACA CGAACAGTCA GGCCAAGGCG
TAA
|
|---|
| Protein sequence | MTNSHSTAGS APAVLFDIDG TLVDSNYLHV HAWHRSFADE GLTVESWRVH RCIGMDGSTL
LDNLVPDADD DTRKRLKDGH SRYYLDDRGL LRLLPGARAL LERIKELGLQ VVLATSAPED
ELDVLREVLD SEDVYSAMTS GEDVDTAKPQ PDIVHIALER AGVDAEHAVF VGDAVWDIEA
CRRAGLTSIG VLSGGVSRGE LTEAGARAVF ENAEDLRVHI DESPVAALLS RADTNSQAKA
|
|---|
| |